ArticleScientific reports2017
Comprehensive genomic analysis of a plant growth-promoting rhizobacterium Pantoea agglomerans strain P5.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 48 papers.
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48 citing papers in PubMed, 101 citations in OpenAlex.
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- Seed-mediated vertical transmission of Pantoea core endophytes.The ISME journal · 2025Article
- Exploring the rhizospheric bacterial community of selected millets for plant growth promotion activity in tomato.Frontiers in plant science · 2025Article
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- Isolation of Heavy Metal-Tolerant and Anti-Phytopathogenic Plant Growth-Promoting Bacteria from Soils.Journal of microbiology and biotechnology · 2024Article
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- Whole genome sequencing and characterization ofFrontiers in microbiology · 2024Article
- Comprehensive genome analysis of3 Biotech · 2023Article
- Comparative genomic analysis ofMicrobial genomics · 2023Article
- Rhizobiome Transplantation: A Novel Strategy beyond Single-Strain/Consortium Inoculation for Crop Improvement.Plants (Basel, Switzerland) · 2023Review
- Production of highly pure R,R-2,3-butanediol for biological plant growth promoting agent using carbon feeding control of Paenibacillus polymyxa MDBDO.Microbial cell factories · 2023Article
Corrections and comments
- Erratum issued
Authors and funding
6 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In this study, we provide a comparative genomic analysis of Pantoea agglomerans strain P5 and 10 closely related strains based on phylogenetic analyses. A next-generation shotgun strategy was implemented using the Illumina HiSeq 2500 technology followed by core- and pan-genome analysis. The genome of P. agglomerans strain P5 contains an assembly size of 5082485 bp with 55.4% G + C content. P. agglomerans consists of 2981 core and 3159 accessory genes for Coding DNA Sequences (CDSs) based on the pan-genome analysis. Strain P5 can be grouped closely with strains PG734 and 299 R using pan and core genes, respectively. All the predicted and annotated gene sequences were allocated to KEGG pathways. Accordingly, genes involved in plant growth-promoting (PGP) ability, including phosphate solubilization, IAA and siderophore production, acetoin and 2,3-butanediol synthesis and bacterial secretion, were assigned. This study provides an in-depth view of the PGP characteristics of strain P5, highlighting its potential use in agriculture as a biofertilizer.
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