Evidence map›Paper›PMID 29141647›Full record

ArticleMicrobial cell factories2017

Regulation of antimicrobial activity and xenocoumacins biosynthesis by pH in Xenorhabdus nematophila.

Shuqi Guo, Shujing Zhang, Xiangling Fang, Qi Liu, Jiangtao Gao, Muhammad Bilal, Yonghong Wang, Xing Zhang

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Life (Basel, Switzerland) · 2022
    Review
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  7. Review
  8. Article
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  10. Article
  11. Article
  12. Article
  13. Bacteria of the GenusFrontiers in microbiology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Shuqi GuoResearch and Development Center of Biorational Pesticides, Key Laboratory of Plant Protection Resources and Pest Management of Ministry of Education, Northwest A&F University, 22 Xinong Road, Yangling, 712100, Shaanxi, China.
Shujing ZhangResearch and Development Center of Biorational Pesticides, Key Laboratory of Plant Protection Resources and Pest Management of Ministry of Education, Northwest A&F University, 22 Xinong Road, Yangling, 712100, Shaanxi, China.
Xiangling FangState Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, China.
Qi LiuResearch and Development Center of Biorational Pesticides, Key Laboratory of Plant Protection Resources and Pest Management of Ministry of Education, Northwest A&F University, 22 Xinong Road, Yangling, 712100, Shaanxi, China.
Jiangtao GaoResearch and Development Center of Biorational Pesticides, Key Laboratory of Plant Protection Resources and Pest Management of Ministry of Education, Northwest A&F University, 22 Xinong Road, Yangling, 712100, Shaanxi, China.
Muhammad BilalState Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China.
Yonghong WangResearch and Development Center of Biorational Pesticides, Key Laboratory of Plant Protection Resources and Pest Management of Ministry of Education, Northwest A&F University, 22 Xinong Road, Yangling, 712100, Shaanxi, China. yhwang@nwsuaf.edu.cn.
Xing ZhangResearch and Development Center of Biorational Pesticides, Key Laboratory of Plant Protection Resources and Pest Management of Ministry of Education, Northwest A&F University, 22 Xinong Road, Yangling, 712100, Shaanxi, China.
Northwest A&F University · CNShanghai Jiao Tong University · CNLanzhou University · CN

Funding

Natural Science Foundation of China 31171910Natural Science Foundation of Shaanxi Provience 2014JZ004
6 · The paper itself

Abstract

backgroundXenocoumacin 1 (Xcn1) and Xenocoumacin 2 (Xcn2) are the main antimicrobial compounds produced by Xenorhabdus nematophila. Culture conditions, including pH, had remarkably distinct effects on the antimicrobial activity of X. nematophila. However, the regulatory mechanism of pH on the antimicrobial activity and antibiotic production of this bacterium is still lacking.

resultsWith the increase of initial pH, the antimicrobial activity of X. nematophila YL001 was improved. The levels of Xcn1 and nematophin at pH 8.5 were significantly (P < 0.05) higher than that at pH 5.5 and 7.0. In addition, the expression of xcnA-L, which are responsible for the production of Xcn1 was increased and the expression of xcnMN, which are required for the conversion of Xcn1 to Xcn2 was reduced at pH 8.5. Also, the expression of ompR and cpxR were decreased at pH 8.5.

conclusionThe alkaline pH environment was found to be beneficial for the production of Xcn1 and nematophin, which in turn led to high antimicrobial activity of X. nematophila at pH 8.5.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsBenzopyransCulture MediaFermentationHydrogen-Ion ConcentrationIndolesXenorhabdusAnti-Bacterial AgentsBacterial ProteinsBenzopyransCulture MediaIndolesnematophinxenocoumacin 1xenocoumacin 2Antibiotic productionAntimicrobial activityBiological controlpHXenorhabdus nematophila YL001

Identifiers

PMID29141647
PMCPMC5688692
OpenAlexW2768793626

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.