Evidence map›Paper›PMID 29138306›Full record

ArticlemBio2017

Key Metabolites and Mechanistic Changes for Salt Tolerance in an Experimentally Evolved Sulfate-Reducing Bacterium,

Aifen Zhou, Rebecca Lau, Richard Baran, Jincai Ma, Frederick von Netzer, Weiling Shi, Drew Gorman-Lewis, Megan L Kempher, Zhili He, Yujia Qin and 10 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mBio, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. OrpR is a σMolecular microbiology · 2021
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Aifen ZhouInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Rebecca LauEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Richard BaranEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Jincai MaInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Frederick von NetzerDepartment of Civil and Environmental Engineering, University of Washington, Seattle, Washington, USA.
Weiling ShiInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Drew Gorman-LewisDepartment of Earth and Space Sciences, University of Washington, Seattle, Washington, USA.
Megan L KempherInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Zhili HeInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Yujia QinInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Zhou ShiInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Grant M ZaneDepartments of Biochemistry and Molecular Microbiology and Immunology, University of Missouri-Columbia, Columbia, Missouri, USA.
Liyou WuInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.
Benjamin P BowenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Trent R NorthenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Kristina L HilleslandSchool of Science, Technology, Engineering and Mathematics, University of Washington Bothell, Bothell, Washington, USA.
David A StahlDepartment of Civil and Environmental Engineering, University of Washington, Seattle, Washington, USA.
Judy D WallDepartments of Biochemistry and Molecular Microbiology and Immunology, University of Missouri-Columbia, Columbia, Missouri, USA.
Adam P ArkinEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Jizhong ZhouInstitute for Environmental Genomics, Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA jzhou@ou.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rapid genetic and phenotypic adaptation of the sulfate-reducing bacterium

Indexed as

Adaptation, BiologicalOsmotic PressureSalt ToleranceBiological EvolutionBiological FactorsDesulfovibrio vulgarisDNA Mutational AnalysisGene Expression ProfilingGenotypeMetabolomicsOxidation-ReductionSulfatesBiological FactorsSulfatescell motilityDesulfovibrio vulgarisenergy efficiencygenomic mutationsorganic solutesPLFAtranscriptomics

Identifiers

PMID29138306
PMCPMC5686539

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.