Evidence map›Paper›PMID 29134812›Full record

ArticleBiochemistry2017

Deoxycholate-Enhanced Shigella Virulence Is Regulated by a Rare π-Helix in the Type Three Secretion System Tip Protein IpaD.

Abram R Bernard, T Carson Jessop, Prashant Kumar, Nicholas E Dickenson

Abstract read
In one paragraph

Article in Biochemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. High pathogenic potential of Shigella flexneri strains descending from a common ancestor isolated over 34 years in Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  3. Review
  4. Functional assays to evaluate antibody-mediated responses againstFrontiers in cellular and infection microbiology · 2023
    Review
  5. Article
  6. Cryo-EM structure of the needle filament tip complex of theProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Article
  8. Structural Studies of theBiochemistry · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Abram R BernardDepartment of Chemistry and Biochemistry, Utah State University , Logan, Utah 84322, United States.
T Carson JessopDepartment of Chemistry and Biochemistry, Utah State University , Logan, Utah 84322, United States.
Prashant KumarDepartment of Pharmaceutical Chemistry, University of Kansas , Lawrence, Kansas 66047, United States.
Nicholas E DickensonDepartment of Chemistry and Biochemistry, Utah State University , Logan, Utah 84322, United States.ORCID http://orcid.org/0000-0003-1572-6077
Utah State University · USUniversity of Kansas · US

Funding

Mechanisms of Type III Secretion System ATPase Activation and RegulationR15AI124108 · NIAID · UTAH STATE UNIVERSITY · PI DICKENSON, NICHOLAS E · 2017 to 2020
$832k
Lipid raft effects on Shigella type III secretion system-based interactionsK22AI099086 · NIAID · UTAH STATE UNIVERSITY · PI DICKENSON, NICHOLAS E · 2013 to 2014
$268k
NIAID NIH HHS K22 AI099086NIAID NIH HHS R15 AI124108
6 · The paper itself

Abstract

Type three secretion systems (T3SS) are specialized nanomachines that support infection by injecting bacterial proteins directly into host cells. The Shigella T3SS has uniquely evolved to sense environmental levels of the bile salt deoxycholate (DOC) and upregulate virulence in response to DOC. In this study, we describe a rare i + 5 hydrogen bonding secondary structure element (π-helix) within the type three secretion system tip protein IpaD that plays a critical role in DOC-enhanced virulence. Specifically, engineered mutations within the π-helix altered the pathogen's response to DOC, with one mutant construct in particular exhibiting an unprecedented reduction in virulence following DOC exposure. Fluorescence polarization binding assays showed that these altered DOC responses are not the result of differences in affinity between IpaD and DOC, but rather differences in the DOC-dependent T3SS tip maturation resulting from binding of IpaD to translocator/effector protein IpaB. Together, these findings begin to uncover the complex mechanism of DOC-enhanced Shigella virulence while identifying an uncommon structural element that may provide a much needed target for non-antibiotic treatment of Shigella infection.

Indexed as

Bacterial ProteinsBile Acids and SaltsDeoxycholic AcidDysentery, BacillaryHeLa CellsHost-Pathogen InteractionsHumansProtein Structure, SecondaryShigella flexneriType III Secretion SystemsVirulenceBacterial ProteinsBile Acids and SaltsDeoxycholic AcidType III Secretion Systems

Identifiers

PMID29134812
PMCPMC5761661
OpenAlexW2769955295

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.