Evidence map›Paper›PMID 29131931›Full record

ArticleBiometrics2018

Covariate-adjusted Spearman's rank correlation with probability-scale residuals.

Qi Liu, Chun Li, Valentine Wanga, Bryan E Shepherd

Abstract read
In one paragraph

Article in Biometrics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Qi LiuMerck, Rahway, New Jersey, U.S.A.
Chun LiDepartment of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, Ohio, U.S.A.
Valentine WangaDepartments of Epidemiology and Global Health, University of Washington, Seattle, Washington, U.S.A.
Bryan E ShepherdDepartment of Biostatistics, Vanderbilt University School of Medicine, Nashville, Tennessee, U.S.A.ORCID 0000-0002-3758-5992

Funding

The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Tennessee CFAR: Implementation of Culturally Responsive Trauma-Informed Care with Youth with HIV in Memphis, TNP30AI110527 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI John Koethe · 2015 to 2026
$27.5M
VIROLOGY COREP30AI054999 · NIAID · VANDERBILT UNIVERSITY · PI D'AQUILA, RICHARD · 2003 to 2011
$10.3M
Statistical Methods for Ordinal Variables in HIV/AIDS StudiesR01AI093234 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Chun Li, Bryan Earl Shepherd · 2011 to 2026
$4.9M
Oxidant Stress and Antioxidants during HIV TherapyK23AT002508 · NCCIH · VANDERBILT UNIVERSITY · PI HULGAN, TODD M · 2004 to 2007
$473k
NCATS NIH HHS UL1 TR000445NCCIH NIH HHS K23 AT002508NIAID NIH HHS P30 AI054999NIAID NIH HHS P30 AI110527NIAID NIH HHS R01 AI093234
6 · The paper itself

Abstract

It is desirable to adjust Spearman's rank correlation for covariates, yet existing approaches have limitations. For example, the traditionally defined partial Spearman's correlation does not have a sensible population parameter, and the conditional Spearman's correlation defined with copulas cannot be easily generalized to discrete variables. We define population parameters for both partial and conditional Spearman's correlation through concordance-discordance probabilities. The definitions are natural extensions of Spearman's rank correlation in the presence of covariates and are general for any orderable random variables. We show that they can be neatly expressed using probability-scale residuals (PSRs). This connection allows us to derive simple estimators. Our partial estimator for Spearman's correlation between X and Y adjusted for Z is the correlation of PSRs from models of X on Z and of Y on Z, which is analogous to the partial Pearson's correlation derived as the correlation of observed-minus-expected residuals. Our conditional estimator is the conditional correlation of PSRs. We describe estimation and inference, and highlight the use of semiparametric cumulative probability models, which allow preservation of the rank-based nature of Spearman's correlation. We conduct simulations to evaluate the performance of our estimators and compare them with other popular measures of association, demonstrating their robustness and efficiency. We illustrate our method in two applications, a biomarker study and a large survey.

Indexed as

ProbabilityStatistics, NonparametricBiomarkersComputer SimulationFemaleHIV InfectionsHumansMozambiqueQuality of LifeSurveys and QuestionnairesBiomarkersConditional correlationCumulative probability modelPartial correlationRank-based statisticSemiparametric transformation model

Identifiers

PMID29131931
PMCPMC5949238

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.