Evidence map›Paper›PMID 29128826›Full record

ArticleRedox biology2018

Redox-sensitive GFP fusions for monitoring the catalytic mechanism and inactivation of peroxiredoxins in living cells.

Verena Staudacher, Madia Trujillo, Tim Diederichs, Tobias P Dick, Rafael Radi, Bruce Morgan, Marcel Deponte

Open access · goldAbstract read
In one paragraph

Article in Redox biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 44 citations in OpenAlex.

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  7. The Yeast eIF2 Kinase Gcn2 Facilitates HApplied and environmental microbiology · 2021
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  15. Differential parameters between cytosolic 2-Cys peroxiredoxins, PRDX1 and PRDX2.Protein science : a publication of the Protein Society · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Verena StaudacherUniversity of Kaiserslautern, Erwin-Schrödinger-Straße 54, D-67663 Kaiserslautern, Germany; Department of Parasitology, Ruprecht-Karls University, Im Neuenheimer Feld 324, D-69120 Heidelberg, Germany; Departamento de Bioquímica, Facultad de Medicina and Center for Free Radical and Biomedical Research, Universidad de la República, Avda. General Flores 2125, 11800 Montevideo, Uruguay.
Madia TrujilloDepartamento de Bioquímica, Facultad de Medicina and Center for Free Radical and Biomedical Research, Universidad de la República, Avda. General Flores 2125, 11800 Montevideo, Uruguay.
Tim DiederichsDepartment of Biology/Cellular Biochemistry, University of Kaiserslautern, Erwin-Schrödinger-Straße 13, D-67663 Kaiserslautern, Germany.
Tobias P DickGerman Cancer Research Center (DKFZ), DKFZ-ZMBH Alliance, Im Neuenheimer Feld 280, D-69120 Heidelberg, Germany.
Rafael RadiDepartamento de Bioquímica, Facultad de Medicina and Center for Free Radical and Biomedical Research, Universidad de la República, Avda. General Flores 2125, 11800 Montevideo, Uruguay. Electronic address: rradi@fmed.edu.uy.
Bruce MorganDepartment of Biology/Cellular Biochemistry, University of Kaiserslautern, Erwin-Schrödinger-Straße 13, D-67663 Kaiserslautern, Germany. Electronic address: morgan@bio.uni-kl.de.
Marcel DeponteUniversity of Kaiserslautern, Erwin-Schrödinger-Straße 54, D-67663 Kaiserslautern, Germany; Department of Parasitology, Ruprecht-Karls University, Im Neuenheimer Feld 324, D-69120 Heidelberg, Germany. Electronic address: deponte@chemie.uni-kl.de.
Heidelberg University · DEUniversidad de la República · UYUniversity of Kaiserslautern · DEGerman Cancer Research Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Redox-sensitive green fluorescent protein 2 (roGFP2) is a valuable tool for redox measurements in living cells. Here, we demonstrate that roGFP2 can also be used to gain mechanistic insights into redox catalysis in vivo. In vitro enzyme properties such as the rate-limiting reduction of wild type and mutant forms of the model peroxiredoxin PfAOP are shown to correlate with the ratiometrically measured degree of oxidation of corresponding roGFP2 fusion proteins. Furthermore, stopped-flow kinetic measurements of the oxidative half-reaction of PfAOP support the interpretation that changes in the roGFP2 signal can be used to map hyperoxidation-based inactivation of the attached peroxidase. Potential future applications of our system include the improvement of redox sensors, the estimation of absolute intracellular peroxide concentrations and the in vivo assessment of protein structure-function relationships that cannot easily be addressed with recombinant enzymes, for example, the effect of post-translational protein modifications on enzyme catalysis.

Indexed as

Green Fluorescent ProteinsHumansHydrogen PeroxideModels, MolecularOxidation-ReductionPeroxiredoxinsPlasmodium falciparumRecombinant Fusion ProteinsGreen Fluorescent ProteinsHydrogen PeroxidePeroxiredoxinsRecombinant Fusion ProteinsH(2)O(2)PeroxiredoxinPlasmodium falciparumRedox sensorroGFP2

Identifiers

PMID29128826
PMCPMC5684490
OpenAlexW2765150607

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.