Evidence map›Paper›PMID 29126393›Full record

ArticleBMC genomics2017

Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa.

Silke Peter, Philipp Oberhettinger, Leonard Schuele, Ariane Dinkelacker, Wichard Vogel, Daniela Dörfel, Daniela Bezdan, Stephan Ossowski, Matthias Marschal, Jan Liese and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 63 citations in OpenAlex.

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  17. Exacerbation of bronchiectasis byExperimental and therapeutic medicine · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

Silke PeterInstitute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany. silke.peter@med.uni-tuebingen.de.ORCID http://orcid.org/0000-0002-1355-3953
Philipp OberhettingerInstitute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
Leonard SchueleInstitute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
Ariane DinkelackerInstitute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
Wichard VogelMedical Center, Department of Hematology, Oncology, Immunology, Rheumatology & Pulmonology, University of Tübingen, Tübingen, Germany.
Daniela DörfelMedical Center, Department of Hematology, Oncology, Immunology, Rheumatology & Pulmonology, University of Tübingen, Tübingen, Germany.
Daniela BezdanCentre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.
Stephan OssowskiCentre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.
Matthias MarschalInstitute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
Jan LieseInstitute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
Matthias WillmannInstitute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
German Center for Infection Research · DEUniversitat Pompeu Fabra · ESGerman Cancer Research Center · DEUniversity Medical Center Groningen · NLUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPseudomonas putida is a Gram-negative, non-fermenting bacterium frequently encountered in various environmental niches. P. putida rarely causes disease in humans, though serious infections and outbreaks have been reported from time to time. Some have suggested that P. putida functions as an exchange platform for antibiotic resistance genes (ARG), and thus represents a serious concern in the spread of ARGs to more pathogenic organisms within a hospital. Though poorly understood, the frequency of ARG exchange between P. putida and the more virulent Pseudomonas aeruginosa and its clinical relevance are particularly important for designing efficient infection control strategies, such as deciding whether high-risk patients colonized with a multidrug resistant but typically low pathogenic P. putida strain should be contact isolated or not.

resultsIn this study, 21,373 screening samples (stool, rectal and throat swab) were examined to determine the presence of P. putida in a high-risk group of haemato-oncology patients during a 28-month period. A total of 89 P. putida group strains were isolated from 85 patients, with 41 of 89 (46.1%) strains harbouring the metallo-beta-lactamase gene bla

conclusionThese data provide evidence that no exchange of comprehensive ARG harbouring mobile genetic elements had occurred between P. aeruginosa and P. putida group strains during the study period, thus eliminating the need to implement enhanced infection control measures for high-risk patients colonized with a bla

Indexed as

EnvironmentGene Transfer, HorizontalGenomicsAnti-Bacterial AgentsDrug Resistance, BacterialHumansPhylogenyPseudomonas aeruginosaPseudomonas putidaAnti-Bacterial AgentsHorizontal gene transferPseudomonas putidaVIM

Identifiers

PMID29126393
PMCPMC5681832
OpenAlexW2767743060

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.