Evidence map›Paper›PMID 29125756›Full record

ArticleJournal of the American Chemical Society2017

Hepatitis B Virus Capsid Completion Occurs through Error Correction.

Corinne A Lutomski, Nicholas A Lyktey, Zhongchao Zhao, Elizabeth E Pierson, Adam Zlotnick, Martin F Jarrold

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
11.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 82 citations in OpenAlex.

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  17. Article
  18. Hepatitis B Core Protein Capsids.Sub-cellular biochemistry · 2021
    Review
  19. Article
  20. Physics of viral dynamics.Nature reviews. Physics · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Corinne A LutomskiChemistry Department, Indiana University , Bloomington, Indiana 47405, United States.
Nicholas A LykteyChemistry Department, Indiana University , Bloomington, Indiana 47405, United States.
Zhongchao ZhaoDepartment of Molecular and Cellular Biochemistry, Indiana University , Bloomington, Indiana 47405, United States.
Elizabeth E PiersonChemistry Department, Indiana University , Bloomington, Indiana 47405, United States.
Adam ZlotnickDepartment of Molecular and Cellular Biochemistry, Indiana University , Bloomington, Indiana 47405, United States.ORCID 0000-0001-9945-6267
Martin F JarroldChemistry Department, Indiana University , Bloomington, Indiana 47405, United States.ORCID 0000-0001-7084-176X
Indiana University Bloomington · US

Funding

Multimode Observation of Virus Capsid AssemblyR01AI118933 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI Adam Zlotnick · 2016 to 2026
$4.0M
NIAID NIH HHS 1RO1 AI118933NIAID NIH HHS R01 AI118933
6 · The paper itself

Abstract

Understanding capsid assembly is important because of its role in virus lifecycles and in applications to drug discovery and nanomaterial development. Many virus capsids are icosahedral, and assembly is thought to occur by the sequential addition of capsid protein subunits to a nucleus, with the final step completing the icosahedron. Almost nothing is known about the final (completion) step because the techniques usually used to study capsid assembly lack the resolution. In this work, charge detection mass spectrometry (CDMS) has been used to track the assembly of the T = 4 hepatitis B virus (HBV) capsid in real time. The initial assembly reaction occurs rapidly, on the time scale expected from low resolution measurements. However, CDMS shows that many of the particles generated in this process are defective and overgrown, containing more than the 120 capsid protein dimers needed to form a perfect T = 4 icosahedron. The defective and overgrown capsids self-correct over time to the mass expected for a perfect T = 4 capsid. Thus, completion is a distinct phase in the assembly reaction. Capsid completion does not necessarily occur by inserting the last building block into an incomplete, but otherwise perfect icosahedron. The initial assembly reaction can be predominently imperfect, and completion involves the slow correction of the accumulated errors.

Indexed as

CapsidHepatitis B virusMass Spectrometry

Identifiers

PMID29125756
PMCPMC6336459
OpenAlexW2767649008

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.