Evidence map›Paper›PMID 29125541›Full record

ReviewInternational journal of molecular sciences2017

The Dark Side of the Epitranscriptome: Chemical Modifications in Long Non-Coding RNAs.

Roland Jacob, Sindy Zander, Tony Gutschner

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. NBMC medical genomics · 2025
    Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Identification of mHeliyon · 2023
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Review

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Roland JacobFaculty of Medicine, Martin-Luther-University Halle-Wittenberg, 06120 Halle (Saale), Germany. roland.jacob@uk-halle.de.
Sindy ZanderFaculty of Medicine, Martin-Luther-University Halle-Wittenberg, 06120 Halle (Saale), Germany. sindy.zander2@uk-halle.de.
Tony GutschnerFaculty of Medicine, Martin-Luther-University Halle-Wittenberg, 06120 Halle (Saale), Germany. tony.gutschner@uk-halle.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The broad application of next-generation sequencing technologies in conjunction with improved bioinformatics has helped to illuminate the complexity of the transcriptome, both in terms of quantity and variety. In humans, 70-90% of the genome is transcribed, but only ~2% carries the blueprint for proteins. Hence, there is a huge class of non-translated transcripts, called long non-coding RNAs (lncRNAs), which have received much attention in the past decade. Several studies have shown that lncRNAs are involved in a plethora of cellular signaling pathways and actively regulate gene expression via a broad selection of molecular mechanisms. Only recently, sequencing-based, transcriptome-wide studies have characterized different types of post-transcriptional chemical modifications of RNAs. These modifications have been shown to affect the fate of RNA and further expand the variety of the transcriptome. However, our understanding of their biological function, especially in the context of lncRNAs, is still in its infancy. In this review, we will focus on three epitranscriptomic marks, namely pseudouridine (Ψ),

Indexed as

Epigenesis, Genetic5-MethylcytosineDNA MethylationGenome, HumanHigh-Throughput Nucleotide SequencingHumansRNA, Long NoncodingTranscriptome5-MethylcytosineRNA, Long Noncoding5-methylcytosinecancerepitranscriptomicslncRNAm5Cm6AN6-methyladenosinenoncoding RNApseudouridine

Identifiers

PMID29125541
PMCPMC5713356

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.