Evidence map›Paper›PMID 29125472›Full record

ArticleJournal of physics. Condensed matter : an Institute of Physics journal2017

Membrane vesiculation induced by proteins of the dengue virus envelope studied by molecular dynamics simulations.

Ricardo de Oliveira Dos Santos Soares, Leandro Oliveira Bortot, David van der Spoel, Antonio Caliri

Open access · bronzeAbstract read
In one paragraph

Article in Journal of physics. Condensed matter : an Institute of Physics journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Martini on the Rocks: Can a Coarse-Grained Force Field Model Crystals?The journal of physical chemistry letters · 2024
    Article
  3. Review
  4. Molecular Dynamics Simulations of Curved Lipid Membranes.International journal of molecular sciences · 2022
    Review
  5. Review
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Ricardo de Oliveira Dos Santos SoaresFaculdade de Medicina de Marília, Marília, Brazil.
Leandro Oliveira BortotFaculdade de Ciências Farmacêuticas de Ribeirão Preto, Departamento de Física e Química, Grupo de Física Biológica, Universidade de São Paulo, Ribeirão Preto, Brazil.
David van der SpoelDepartment of Cell and Molecular Biology, Uppsala Centre for Computational Chemistry, Science for Life Laboratory, Uppsala University, Box 596, SE-75124 Uppsala, Sweden.ORCID 0000-0002-7659-8526
Antonio CaliriFaculdade de Ciências Farmacêuticas de Ribeirão Preto, Departamento de Física e Química, Grupo de Física Biológica, Universidade de São Paulo, Ribeirão Preto, Brazil.
Universidade de São Paulo · BRFaculdade de Medicina de Marília · BRUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological membranes are continuously remodeled in the cell by specific membrane-shaping machineries to form, for example, tubes and vesicles. We examine fundamental mechanisms involved in the vesiculation processes induced by a cluster of envelope (E) and membrane (M) proteins of the dengue virus (DENV) using molecular dynamics simulations and a coarse-grained model. We show that an arrangement of three E-M heterotetramers (EM

Indexed as

Molecular Dynamics SimulationCell MembraneDengue VirusProtein Structure, SecondaryViral Envelope ProteinsViral Envelope Proteins

Identifiers

PMID29125472
PMCPMC7104865
OpenAlexW2767513532

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.