Evidence map›Paper›PMID 29123460›Full record

ArticleLetters in organic chemistry2017

FledFold: A Novel Software for RNA Secondary Structure Prediction.

Qi Zhao, Yuanning Liu, Yunna Duan, Tao Dai, Rui Xu, Hao Guo, Daiming Fan, Yongzhan Nie, Hao Zhang

Abstract read
In one paragraph

Article in Letters in organic chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Qi ZhaoComputer Science and Technology Department, Jilin University, Changchun, 130000, China.
Yuanning LiuComputer Science and Technology Department, Jilin University, Changchun, 130000, China.
Yunna DuanComputer Science and Technology Department, Jilin University, Changchun, 130000, China.
Tao DaiComputer Science and Technology Department, Jilin University, Changchun, 130000, China.
Rui XuComputer Science and Technology Department, Jilin University, Changchun, 130000, China.
Hao GuoState Key Laboratory of Cancer Biology, Fourth Military Medical University, Xi'an, 710000, China.
Daiming FanState Key Laboratory of Cancer Biology, Fourth Military Medical University, Xi'an, 710000, China.
Yongzhan NieState Key Laboratory of Cancer Biology, Fourth Military Medical University, Xi'an, 710000, China.
Hao ZhangComputer Science and Technology Department, Jilin University, Changchun, 130000, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRNA secondary structure is essential to understand the mechanism of RNAs.

methodIn this paper, fledFold, a novel software for RNA secondary structure prediction, is introduced. It combines both thermodynamic and kinetic factors of RNA secondary structures and can predict RNA secondary structures from their primary sequences with local personal computers.

resultsFledFold is implemented in C++ under Windows 7 and could run on windows 7 or later version with at least 2 GB of RAM. Fledfold is user friendly and could output results with multiple formats. CONSLUSION: FledFold will be a valuable tool for RNA researches and it could be downloaded freely from http://www.jlucomputer.com/fledfold.php.

Indexed as

Bioinformatics toolscomputermolecule structureprimary sequencesRNA secondary structure predictionsoftware

Identifiers

PMID29123460
PMCPMC5652076

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.