Evidence map›Paper›PMID 29123153›Full record

ArticleScientific reports2017

A genome-wide association study links small-vessel ischemic stroke to autophagy.

Tsong-Hai Lee, Tai-Ming Ko, Chien-Hsiun Chen, Yeu-Jhy Chang, Liang-Suei Lu, Chien-Hung Chang, Kuo-Lun Huang, Ting-Yu Chang, Jiann-Der Lee, Ku-Chou Chang and 9 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Genetics in Ischemic Stroke: Current Perspectives and Future Directions.Journal of cardiovascular development and disease · 2023
    Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Pathogenic Single Nucleotide Polymorphisms on Autophagy-Related Genes.International journal of molecular sciences · 2020
    Review
  9. Article
  10. Article
  11. Emerging molecular mechanisms of vascular dementia.Current opinion in hematology · 2019
    Review
  12. Pathophysiology of Long Non-coding RNAs in Ischemic Stroke.Frontiers in molecular neuroscience · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 2 countries.

Tsong-Hai LeeChang Gung Memorial Hospital, Linkou Medical Center, and Chang Gung University College of Medicine, Taoyuan, Taiwan.
Tai-Ming KoInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Chien-Hsiun ChenInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Yeu-Jhy ChangChang Gung Memorial Hospital, Linkou Medical Center, and Chang Gung University College of Medicine, Taoyuan, Taiwan.
Liang-Suei LuInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Chien-Hung ChangChang Gung Memorial Hospital, Linkou Medical Center, and Chang Gung University College of Medicine, Taoyuan, Taiwan.
Kuo-Lun HuangChang Gung Memorial Hospital, Linkou Medical Center, and Chang Gung University College of Medicine, Taoyuan, Taiwan.
Ting-Yu ChangChang Gung Memorial Hospital, Linkou Medical Center, and Chang Gung University College of Medicine, Taoyuan, Taiwan.
Jiann-Der LeeChang Gung Memorial Hospital, Chiayi Branch, and Chang Gung University College of Medicine, Chiayi, Taiwan.
Ku-Chou ChangChang Gung Memorial Hospital, Kaohsiung Medical Center, and Chang Gung University College of Medicine, Kaohsiung, Taiwan.
Jen-Tsung YangChang Gung Memorial Hospital, Chiayi Branch, and Chang Gung University College of Medicine, Chiayi, Taiwan.
Ming-Shien WenChang Gung Memorial Hospital, Linkou Medical Center, and Chang Gung University College of Medicine, Taoyuan, Taiwan.
Chao-Yung WangChang Gung Memorial Hospital, Linkou Medical Center, and Chang Gung University College of Medicine, Taoyuan, Taiwan.
Ying-Ting ChenInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Tsai-Chuan ChenInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.
Shu-Yu ChouChang Gung Memorial Hospital, Linkou Medical Center, and Chang Gung University College of Medicine, Taoyuan, Taiwan.
Ming-Ta Michael LeeGenomic Medicine Institute, Geisinger Health System, Danville, Pennsylvania, USA.ORCID 0000-0003-2510-8977
Yuan-Tsong ChenInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan. chen0010@ibms.sinica.edu.tw.
Jer-Yuarn WuInstitute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan. jywu@ibms.sinica.edu.tw.
Chang Gung University · TWChina Medical University · TWDuke University · USInstitute of Biomedical Sciences, Academia Sinica · TWGeisinger Health System · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-wide association studies (GWAS) can serve as strong evidence in correlating biological pathways with human diseases. Although ischemic stroke has been found to be associated with many biological pathways, the genetic mechanism of ischemic stroke is still unclear. Here, we performed GWAS for a major subtype of stroke-small-vessel occlusion (SVO)-to identify potential genetic factors contributing to ischemic stroke. GWAS were conducted on 342 individuals with SVO stroke and 1,731 controls from a Han Chinese population residing in Taiwan. The study was replicated in an independent Han Chinese population comprising an additional 188 SVO stroke cases and 1,265 controls. Three SNPs (rs2594966, rs2594973, rs4684776) clustered at 3p25.3 in ATG7 (encoding Autophagy Related 7), with P values between 2.52 × 10

Indexed as

AutophagyPolymorphism, Single NucleotideAgedAutophagy-Related Protein 7Brain IschemiaFemaleGenome-Wide Association StudyHumansMaleMiddle AgedStrokeTaiwanATG7 protein, humanAutophagy-Related Protein 7

Identifiers

PMID29123153
PMCPMC5680343
OpenAlexW2765794416

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.