Evidence map›Paper›PMID 29123102›Full record

ArticleNature communications2017

Semisynthetic fluorescent pH sensors for imaging exocytosis and endocytosis.

Magalie Martineau, Agila Somasundaram, Jonathan B Grimm, Todd D Gruber, Daniel Choquet, Justin W Taraska, Luke D Lavis, David Perrais

Abstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

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  16. Optimized Red-Absorbing Dyes for Imaging and Sensing.Journal of the American Chemical Society · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Magalie MartineauUniversity of Bordeaux, F-33000, Bordeaux, France.ORCID http://orcid.org/0000-0003-1817-2372
Agila SomasundaramNational Heart, Lung, and Blood Institute, US National Institutes of Health, Bethesda, MD, 20892, USA.
Jonathan B GrimmJanelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA, 20147, USA.
Todd D GruberJanelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA, 20147, USA.
Daniel ChoquetUniversity of Bordeaux, F-33000, Bordeaux, France.ORCID http://orcid.org/0000-0003-4726-9763
Justin W TaraskaNational Heart, Lung, and Blood Institute, US National Institutes of Health, Bethesda, MD, 20892, USA. justin.taraska@nih.gov.ORCID http://orcid.org/0000-0001-5355-9535
Luke D LavisJanelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, VA, 20147, USA. lavisl@janelia.hhmi.org.ORCID http://orcid.org/0000-0002-0789-6343
David PerraisUniversity of Bordeaux, F-33000, Bordeaux, France.ORCID http://orcid.org/0000-0002-5878-5408

Funding

Architecture and control of vesicle fusion in excitable cellsZIAHL006098 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI TARASKA, JUSTIN · 2011 to 2025
$25.5M
Howard Hughes Medical Institute
6 · The paper itself

Abstract

The GFP-based superecliptic pHluorin (SEP) enables detection of exocytosis and endocytosis, but its performance has not been duplicated in red fluorescent protein scaffolds. Here we describe "semisynthetic" pH-sensitive protein conjugates with organic fluorophores, carbofluorescein, and Virginia Orange that match the properties of SEP. Conjugation to genetically encoded self-labeling tags or antibodies allows visualization of both exocytosis and endocytosis, constituting new bright sensors for these key steps of synaptic transmission.

Indexed as

EndocytosisExocytosisFluorescent DyesAnimalsBiosensing TechniquesDrug DesignFluoresceinsGreen Fluorescent ProteinsHippocampusHydrogen-Ion ConcentrationLuminescent ProteinsNeuronsPC12 CellsRatsRed Fluorescent ProteinSynaptic TransmissionFluoresceinsFluorescent DyesGreen Fluorescent ProteinsLuminescent ProteinsPHluorinRed Fluorescent Protein

Identifiers

PMID29123102
PMCPMC5680258

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.