Evidence map›Paper›PMID 29120256›Full record

ArticleRNA biology2018

Silent but deadly: IS200 promotes pathogenicity in Salmonella Typhimurium.

Michael J Ellis, Lindsey A Carfrae, Craig R Macnair, Ryan S Trussler, Eric D Brown, David B Haniford

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Michael J Ellisa Department of Biochemistry , University of Western Ontario , London , ON Canada.ORCID 0000-0002-4993-9823
Lindsey A Carfraeb Department of Biochemistry and Biomedical Sciences, Michael G. DeGroote Institute for Infectious Disease Research , McMaster University , Hamilton , ON Canada.
Craig R Macnairb Department of Biochemistry and Biomedical Sciences, Michael G. DeGroote Institute for Infectious Disease Research , McMaster University , Hamilton , ON Canada.
Ryan S Trusslera Department of Biochemistry , University of Western Ontario , London , ON Canada.
Eric D Brownb Department of Biochemistry and Biomedical Sciences, Michael G. DeGroote Institute for Infectious Disease Research , McMaster University , Hamilton , ON Canada.
David B Haniforda Department of Biochemistry , University of Western Ontario , London , ON Canada.
McMaster University · CAWestern University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial transposons were long thought of as selfish mobile genetic elements that propagate at the expense of 'host' bacterium fitness. However, limited transposition can benefit the host organism by promoting DNA rearrangements and facilitating horizontal gene transfer. Here we discuss and provide context for our recently published work which reported the surprising finding that an otherwise dormant transposon, IS200, encodes a regulatory RNA in Salmonella Typhimurium. This previous work identified a trans-acting sRNA that is encoded in the 5'UTR of IS200 transposase mRNA (tnpA). This sRNA represses expression of genes encoded within Salmonella Pathogenicity Island 1 (SPI-1), and accordingly limits invasion into non-phagocytic cells in vitro. We present new data here that shows IS200 elements are important for colonization of the mouse gastrointestinal tract. We discuss our previous and current findings in the context of transposon biology and suggest that otherwise 'silent' transposons may in fact play an important role in controlling host gene expression.

Indexed as

DNA Transposable Elements5' Untranslated RegionsAnimalsBacterial ProteinsDown-RegulationGastrointestinal TractGene Expression Regulation, BacterialMiceRNA, Small UntranslatedSalmonella Infections, AnimalSalmonella typhimuriumTransposasesVirulence5' Untranslated RegionsBacterial ProteinsDNA Transposable ElementsRNA, Small UntranslatedTransposasesinvFIS200Salmonella TyphimuriumSPI-1sRNAtransposon

Identifiers

PMID29120256
PMCPMC5798945
OpenAlexW2767668961

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.