Evidence map›Paper›PMID 29119627›Full record

ArticleGenes, chromosomes & cancer2018

Colorectal cancer susceptibility loci as predictive markers of rectal cancer prognosis after surgery.

Yue Hu, Jochen Gaedcke, Georg Emons, Tim Beissbarth, Marian Grade, Peter Jo, Meredith Yeager, Stephen J Chanock, Hendrik Wolff, Jordi Camps and 2 more

Abstract read
In one paragraph

Article in Genes, chromosomes & cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 1 synthesis or guideline pooled it, 129 citations in OpenAlex.

  1. Pooled it
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  20. Genes & diseases · 2025
    Article

28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Yue HuSection of Cancer Genomics, Genetics Branch, National Cancer Institute, Bethesda, MD, 20892.
Jochen GaedckeDepartment of General, Visceral and Pediatric Surgery, University Medical Center, Göttingen, 37075, Germany.
Georg EmonsSection of Cancer Genomics, Genetics Branch, National Cancer Institute, Bethesda, MD, 20892.
Tim BeissbarthDepartment of Medical Statistics, University Medical Center, Göttingen, 37075, Germany.
Marian GradeDepartment of General, Visceral and Pediatric Surgery, University Medical Center, Göttingen, 37075, Germany.
Peter JoDepartment of General, Visceral and Pediatric Surgery, University Medical Center, Göttingen, 37075, Germany.
Meredith YeagerDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, 20850.
Stephen J ChanockDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, 20850.
Hendrik WolffDepartment of Radiation Oncology, University Medical Center, Göttingen, 37075, Germany.
Jordi CampsSection of Cancer Genomics, Genetics Branch, National Cancer Institute, Bethesda, MD, 20892.
B Michael GhadimiDepartment of General, Visceral and Pediatric Surgery, University Medical Center, Göttingen, 37075, Germany.
Thomas RiedSection of Cancer Genomics, Genetics Branch, National Cancer Institute, Bethesda, MD, 20892.ORCID 0000-0002-0767-6009
Universitätsmedizin Göttingen · DENational Cancer Institute · US

Funding

Intratumor heterogeneity and tumor evolutionZIABC010834 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2009 to 2023
$12.2M
Prediction of Therapy Response in Colorectal CancerZIABC010837 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2009 to 2022
$8.9M
Identifying Diagnostic Markers for Cervical Cancer, Breast Cancer, and Prostate Z01BC010834 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2007 to 2008
$1.3M
Intramural NIH HHS Z01 BC010834
6 · The paper itself

Abstract

To understand the molecular mechanism of rectal cancer and develop markers for disease prognostication, we generated and explored a dataset from 243 rectal cancer patients by gene expression microarray analysis of cancer samples and matched controls, and SNP-arrays of germline DNA. We found that two of the loci most strongly linked with colorectal cancer (CRC) risk, 8q24 (upstream of MYC) and 18q21 (in the intron of SMAD7), as well as 20q13 (in the intron of LAMA5), are tightly associated with the prognosis of rectal cancer patients. For SNPs on 18q21 (rs12953717 and rs4464148) and 20q13 (rs4925386), alleles that correlate with higher risk for the development of CRC are associated with shorter disease free survival (DFS). However, for rs6983267 on 8q24, the low risk allele is associated with a higher risk for recurrence and metastasis after surgery, and importantly, is strongly correlated with the resistance of CRC cell lines to chemoradiotherapy (CRT). We also found that although MYC expression is dramatically increased in cancer, patients with higher levels of MYC have a better prognosis. The expression of SMAD7 is weakly correlated with DFS. Notably, the presence of the 8q24 and 18q21 SNP alleles is not correlated with expression levels of MYC and SMAD7. rs4464148, and probably rs6983267 and rs4925386, are linked with overall survival time of patients. In conclusion, we show that several CRC risk SNPs detect subpopulations of rectal cancer patients with poor prognosis, and that rs6983267 probably affects prognosis through interfering with the resistance of cancer cells to CRT.

Indexed as

AgedAllelesChromosomes, Human, Pair 18Chromosomes, Human, Pair 8Colonic NeoplasmsColorectal NeoplasmsFemaleGenetic Predisposition to DiseaseGenetic TestingGenome-Wide Association StudyGenotypeHumansMaleMiddle AgedNeoplasm Recurrence, LocalPolymorphism, Single NucleotideSmad7 ProteinSMAD7 protein, human

Identifiers

PMID29119627
PMCPMC5778444
OpenAlexW2949821018

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.