Evidence map›Paper›PMID 29119365›Full record

ArticleMolecular genetics and genomics : MGG2018

Pectin methylesterase inhibitor (PMEI) family can be related to male sterility in Chinese cabbage (Brassica rapa ssp. pekinensis).

Chong Tan, Zhiyong Liu, Shengnan Huang, Chengyu Li, Jie Ren, Xiaoyan Tang, Wenjie Liu, Shenling Peng, Hui Feng

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Article in Molecular genetics and genomics : MGG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

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16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  11. Genome-based breeding approaches in major vegetable crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  12. Article
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  14. The Multifaceted Role of Pectin Methylesterase Inhibitors (PMEIs).International journal of molecular sciences · 2018
    Review
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  16. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

9 authors.

Chong TanLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Zhiyong LiuLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Shengnan HuangLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Chengyu LiLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Jie RenLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Xiaoyan TangLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Wenjie LiuLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Shenling PengLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China.
Hui FengLiaoning Key Lab of Genetics and Breeding for Cruciferous Vegetable Crops, Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, People's Republic of China. fenghuiaaa@263.net.ORCID http://orcid.org/0000-0002-6345-6633

Funding

the National Natural Science Foundation of China 31672144
6 · The paper itself

Abstract

Pectin-related genes play significant roles in pollen development and pollen tube growth, and their allelic variations are one of the major reasons for the abnormal development of male gametophyte. Currently, little is known about the role of the PMEI family in male sterility of plants. In this study, 97 putative PMEI genes were identified in Brassica rapa genome. By a phylogenetic analysis, the PMEI family was divided into 10 clades with highly conserved structural characteristics. The publically available RNA-seq data on different tissues of B. rapa accession Chiifu-401-42 revealed that 23 PMEI isoforms were flower-specific genes. We created a recessive genic male sterile mutant (ftms) in Chinese cabbage. This mutant was a doubled haploid line with stable inheritance, derived from Chinese cabbage 'FT' generated through a combination of radiation mutagenesis and isolated microspore culture. The transcriptome profiles of the floral buds of ftms and its wild-type line 'FT' were determined using RNA-seq. A total of 17 PMEI genes were found to be differentially expressed; all of them were down-regulated in ftms compared to their levels in 'FT'. Consistent with the transcriptome data, all these genes were observed to be highly expressed in the floral buds of 'FT' using qRT-PCR analysis. Of these, eight genes were specifically expressed in the floral buds of 'FT'; three of these (Bra019903, Bra014099, and Bra032239) were stamen-specific genes. The results contribute to further elucidation of the regulatory mechanisms underlying male sterility in Chinese cabbage.

Indexed as

Multigene FamilyAmino Acid SequenceArabidopsisBrassica rapaChromosome MappingChromosomes, PlantGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantPhylogenyPlant InfertilityPlant ProteinsPollenProtein IsoformsSyntenyPlant ProteinsProtein IsoformsChinese cabbageComparative genome analysisMale sterilityPectin methylesterase inhibitorTranscriptomic analysis

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.