Evidence map›Paper›PMID 29118334›Full record

ArticleScientific reports2017

Temporal and spatial expression of genes involved in DNA methylation during reproductive development of sexual and apomictic Eragrostis curvula.

J P Selva, L Siena, J M Rodrigo, I Garbus, D Zappacosta, J R Romero, J P A Ortiz, S C Pessino, O Leblanc, V Echenique

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
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  4. New insights intoFrontiers in plant science · 2025
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  5. Recent Progress on Plant Apomixis for Genetic Improvement.International journal of molecular sciences · 2024
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  9. Review
  10. Plants (Basel, Switzerland) · 2021
    Review
  11. Article
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  15. Article
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  17. Article
  18. Article
  19. Article
  20. A High-Density Linkage Map of the Forage GrassFrontiers in plant science · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

J P SelvaCERZOS-CONICET, CCT-Bahía Blanca, 8000, Bahía Blanca, Argentina.
L SienaIICAR-CONICET/Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Parque Villarino, S2125ZAA, Zavalla, Argentina.
J M RodrigoCERZOS-CONICET, CCT-Bahía Blanca, 8000, Bahía Blanca, Argentina.
I GarbusDepartamento de Ciencias de la Salud, Universidad Nacional del Sur, 8000, Bahía Blanca, Argentina.
D ZappacostaCERZOS-CONICET, CCT-Bahía Blanca, 8000, Bahía Blanca, Argentina.
J R RomeroCERZOS-CONICET, CCT-Bahía Blanca, 8000, Bahía Blanca, Argentina.
J P A OrtizIICAR-CONICET/Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Parque Villarino, S2125ZAA, Zavalla, Argentina.
S C PessinoIICAR-CONICET/Laboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Parque Villarino, S2125ZAA, Zavalla, Argentina.
O LeblancDIADE, IRD, Univ Montpellier, Montpellier, France. olivier.leblanc@ird.fr.
V EcheniqueCERZOS-CONICET, CCT-Bahía Blanca, 8000, Bahía Blanca, Argentina. echeniq@criba.edu.ar.
Centro Científico Tecnológico - Bahía Blanca · ARUniversidad Nacional del Sur · ARNational University of Rosario · ARInstituto de Investigaciones en Ciencias Agrarias de Rosario · ARUniversité de Montpellier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent reports in model plant species have highlighted a role for DNA methylation pathways in the regulation of the somatic-to-reproductive transition in the ovule, suggesting that apomixis (asexual reproduction through seeds) likely relies on RdDM downregulation. Our aim was therefore to explore this hypothesis by characterizing genes involved in DNA methylation in the apomictic grass Eragrostis curvula. We explored floral transcriptomes to identify homologs of three candidate genes, for which mutations in Arabidopsis and maize mimic apomixis (AtAGO9/ZmAGO104, AtCMT3/ZmDMT102/ZmDMT105, and AtDDM1/ZmCHR106), and compared both their spatial and temporal expression patterns during reproduction in sexual and apomictic genotypes. Quantitative expression analyses revealed contrasting expression patterns for the three genes in apomictic vs sexual plants. In situ hybridization corroborated these results for two candidates, EcAGO104 and EcDMT102, and revealed an unexpected ectopic pattern for the AGO gene during germ line differentiation in apomicts. Although our data partially support previous results obtained in sexual plant models, they suggest that rather than an RdDM breakdown in the ovule, altered localization of AtAGO9/ZmAGO104 expression is required for achieving diplospory in E. curvula. The differences in the RdDM machinery acquired during plant evolution might have promoted the emergence of the numerous apomictic paths observed in plants.

Indexed as

DNA MethylationGene Expression Regulation, PlantApomixisArabidopsisFlowersGene Expression ProfilingGenes, PlantGenotypeMutationReproductionSeedsZea mays

Identifiers

PMID29118334
PMCPMC5678148
OpenAlexW2767056811

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.