Evidence map›Paper›PMID 29118316›Full record

ArticleNature communications2017

Distinct Campylobacter fetus lineages adapted as livestock pathogens and human pathobionts in the intestinal microbiota.

Gregorio Iraola, Samuel C Forster, Nitin Kumar, Philippe Lehours, Sadjia Bekal, Francisco J García-Peña, Fernando Paolicchi, Claudia Morsella, Helmut Hotzel, Po-Ren Hsueh and 18 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
8.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Campylobacter in Africa - A specific viewpoint.European journal of microbiology & immunology · 2023
    Review
  8. Review
  9. Article
  10. Antimicrobial resistance inMicrobial genomics · 2023
    Article
  11. Frontiers in microbiology · 2023
    Article
  12. Comparative genomic analysis ofFrontiers in microbiology · 2023
    Article
  13. Article
  14. Genomic epidemiology ofFrontiers in veterinary science · 2022
    Article
  15. Article
  16. Complete Genome Sequence of Campylobacter fetus subsp.Microbiology resource announcements · 2021
    Article
  17. Article
  18. Phylogenomic analysis forVeterinary world · 2021
    Article
  19. Accurate and fast identification ofVeterinary and animal science · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 16 institutions in 13 countries.

Gregorio IraolaUnidad de Bioinformática, Institut Pasteur Montevideo, 11400, Montevideo, Uruguay. giraola@pasteur.edu.uy.ORCID http://orcid.org/0000-0002-6516-3404
Samuel C ForsterHost-Microbiota Interactions Laboratory, Wellcome Trust Sanger Institute, CB10 1SA, Hinxton, UK.ORCID http://orcid.org/0000-0003-4144-2537
Nitin KumarHost-Microbiota Interactions Laboratory, Wellcome Trust Sanger Institute, CB10 1SA, Hinxton, UK.
Philippe LehoursBordeaux Research in Translational Oncology, INSERM UMR1053, University of Bordeaux, 33076, Bordeaux, France.
Sadjia BekalLaboratoire de Santé Publique du Québec, Institut National de Santé Publique du Québec, Sainte-Anne-de-Bellevue, QC, Canada, H9X 3Y3.
Francisco J García-PeñaDepartamento de Bacteriología, Laboratorio Central de Veterinaria de Algete (MAGRAMA), 28110, Algete, Spain.
Fernando PaolicchiLaboratorio de Bacteriología, EEA-INTA Balcarce, Balcarce, 7620, Argentina.
Claudia MorsellaLaboratorio de Bacteriología, EEA-INTA Balcarce, Balcarce, 7620, Argentina.
Helmut HotzelFriedrich-Loeffler-Institut, Institute of Bacterial Infections and Zoonoses, 07743, Jena, Germany.ORCID http://orcid.org/0000-0002-2413-296X
Po-Ren HsuehDepartments of Laboratory Medicine and Internal Medicine, National Taiwan University Hospital, Taipei, 10617, Taiwan.
Ana VidalAnimal and Plant Health Association (APHA), Addlestone, KT15 3NB, UK.
Simon LévesqueLaboratoire de Santé Publique du Québec, Institut National de Santé Publique du Québec, Sainte-Anne-de-Bellevue, QC, Canada, H9X 3Y3.
Wataru YamazakiDepartment of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki, 889-2192, Japan.
Claudia BalzanDepartamento de Medicina Veterinária Preventiva, Universidade Federal de Santa Maria, Santa Maria, 97105-900, Brazil.ORCID http://orcid.org/0000-0003-1203-8017
Agueda VargasDepartamento de Medicina Veterinária Preventiva, Universidade Federal de Santa Maria, Santa Maria, 97105-900, Brazil.
Alessandra PiccirilloDepartment of Comparative Biomedicine and Food Science, University of Padova, Padova, 35122, Italy.ORCID http://orcid.org/0000-0002-6207-4721
Bonnie ChabanFaculty of Science, Health, Education and Engineering, University of the Sunshine Coast, Sippy Downs, QLD, 4556, Australia.
Janet E HillDepartment of Veterinary Microbiology, University of Saskatchewan, Saskatchewan, SK, Canada, S7N 5A2.
Laura BetancorInstituto de Higiene, Facultad de Medicina, Universidad de la República, Montevideo, 11600, Uruguay.
Luis ColladoInstituto de Bioquímica y Microbiología, Facultad de Ciencias, Universidad Austral de Chile, 5090000, Valdivia, Chile.ORCID http://orcid.org/0000-0002-7140-4219
Isabelle TruyersRoyal (Dick) School of Veterinary Studies, University of Edinburgh, Midlothian, EH25 9RG, UK.
Anne C MidwinterEpiLab, Infectious Disease Research Centre, Massey University, Palmerston North, 4442, New Zealand.
Hatice T DagiDepartment of Microbiology, Faculty of Medicine, Selçuk University, Selçuklu, 42250, Turkey.
Francis MégraudBordeaux Research in Translational Oncology, INSERM UMR1053, University of Bordeaux, 33076, Bordeaux, France.
Lucía CallerosSección Genética Evolutiva, Facultad de Ciencias, Universidad de la República, 11400, Montevideo, Uruguay.
Ruben PérezSección Genética Evolutiva, Facultad de Ciencias, Universidad de la República, 11400, Montevideo, Uruguay.
Hugo NayaUnidad de Bioinformática, Institut Pasteur Montevideo, 11400, Montevideo, Uruguay.ORCID http://orcid.org/0000-0001-6982-4399
Trevor D LawleyHost-Microbiota Interactions Laboratory, Wellcome Trust Sanger Institute, CB10 1SA, Hinxton, UK. tl2@sanger.ac.uk.
Universidad de la República de Uruguay · UYWellcome Sanger Institute · GBInstitut National de Santé Publique du Québec · CAUniversidade Federal de Santa Maria · BRUniversité de Bordeaux · FRAnimal and Plant Health Agency · GBAustral University of Chile · CLFriedrich-Loeffler-Institut · DEMassey University · NZNational Taiwan University Hospital · TWSelçuk University · TRUniversity of Edinburgh · GBUniversity of Miyazaki · JPUniversity of Padua · ITUniversity of Saskatchewan · CAUniversity of the Sunshine Coast · AU

Funding

Medical Research Council PF451Wellcome TrustWellcome Trust 098051
6 · The paper itself

Abstract

Campylobacter fetus is a venereal pathogen of cattle and sheep, and an opportunistic human pathogen. It is often assumed that C. fetus infection occurs in humans as a zoonosis through food chain transmission. Here we show that mammalian C. fetus consists of distinct evolutionary lineages, primarily associated with either human or bovine hosts. We use whole-genome phylogenetics on 182 strains from 17 countries to provide evidence that C. fetus may have originated in humans around 10,500 years ago and may have "jumped" into cattle during the livestock domestication period. We detect C. fetus genomes in 8% of healthy human fecal metagenomes, where the human-associated lineages are the dominant type (78%). Thus, our work suggests that C. fetus is an unappreciated human intestinal pathobiont likely spread by human to human transmission. This genome-based evolutionary framework will facilitate C. fetus epidemiology research and the development of improved molecular diagnostics and prevention schemes for this neglected pathogen.

Indexed as

Gastrointestinal MicrobiomeAnimalsCampylobacter fetusCampylobacter InfectionsCattleCattle DiseasesFecesHost-Pathogen InteractionsHumansMalePhylogeny

Identifiers

PMID29118316
PMCPMC5678084
OpenAlexW2765684905

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.