Evidence map›Paper›PMID 29117526›Full record

ArticleBiophysical journal2017

Lysenin Toxin Membrane Insertion Is pH-Dependent but Independent of Neighboring Lysenins.

Ignacio L B Munguira, Hirohide Takahashi, Ignacio Casuso, Simon Scheuring

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Challenges and approaches to studying pore-forming proteins.Biochemical Society transactions · 2021
    Review
  5. Lysenin Channels as Sensors for Ions and Molecules.Sensors (Basel, Switzerland) · 2020
    Review
  6. Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Ignacio L B MunguiraU1006 INSERM, Université Aix-Marseille, Parc Scientifique et Technologique de Luminy, Marseille, France.
Hirohide TakahashiU1006 INSERM, Université Aix-Marseille, Parc Scientifique et Technologique de Luminy, Marseille, France; Departments of Anesthesiology and Physiology and Biophysics, Weill Cornell Medical College, New York, New York.
Ignacio CasusoU1006 INSERM, Université Aix-Marseille, Parc Scientifique et Technologique de Luminy, Marseille, France.
Simon ScheuringU1006 INSERM, Université Aix-Marseille, Parc Scientifique et Technologique de Luminy, Marseille, France; Departments of Anesthesiology and Physiology and Biophysics, Weill Cornell Medical College, New York, New York. Electronic address: sis2019@med.cornell.edu.
Cornell University · USInserm · FR

Funding

European Research Council 310080
6 · The paper itself

Abstract

Pore-forming toxins form a family of proteins that act as virulence factors of pathogenic bacteria, but similar proteins are found in all kingdoms of life, including the vertebrate immune system. They are secreted as soluble monomers that oligomerize on target membranes in the so-called prepore state; after activation, they insert into the membrane and adopt the pore state. Lysenin is a pore-forming toxin from the earthworm Eisenida foetida, of which both the soluble and membrane-inserted structures are solved. However, the activation and membrane-insertion mechanisms have remained elusive. Here, we used high-speed atomic force microscopy to directly visualize the membrane-insertion mechanism. Changing the environmental pH from pH 7.5 to below pH 6.0 favored membrane insertion. We detected a short α-helix in the soluble structure that comprised three glutamic acids (Glu92, Glu94, and Glu97) that we hypothesized may represent a pH-sensor (as in similar toxins, e.g., Listeriolysin). Mutant lysenin still can form pores, but mutating these glutamic acids to glutamines rendered the toxin pH-insensitive. On the other hand, toxins in the pore state did not favor insertion of neighboring prepores; indeed, pore insertion breaks the hexagonal ordered domains of prepores and separates from neighboring molecules in the membrane. pH-dependent activation of toxins may represent a common feature of pore-forming toxins. High-speed atomic force microscopy with single-molecule resolution at high temporal resolution and the possibility of exchanging buffers during the experiments presents itself as a unique tool for the study of toxin-state conversion.

Indexed as

Cell MembraneHydrogen-Ion ConcentrationModels, MolecularPorosityProtein Conformation, alpha-HelicalToxins, BiologicallyseninToxins, Biological

Identifiers

PMID29117526
PMCPMC5685674
OpenAlexW2768085766

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.