Evidence map›Paper›PMID 29117524›Full record

ArticleBiophysical journal2017

Cholesterol Promotes Protein Binding by Affecting Membrane Electrostatics and Solvation Properties.

Milka Doktorova, Frederick A Heberle, Richard L Kingston, George Khelashvili, Michel A Cuendet, Yi Wen, John Katsaras, Gerald W Feigenson, Volker M Vogt, Robert A Dick

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 48 citations in OpenAlex.

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  20. Binding of CaStructure (London, England : 1993) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Milka DoktorovaTri-Institutional PhD Program in Computational Biology and Medicine, Weill Cornell Medical College, New York, New York.
Frederick A HeberleThe Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, Knoxville, Tennessee; Joint Institute for Biological Sciences, Oak Ridge National Laboratory, Oak Ridge, Tennessee; Biology and Soft Matter Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee. Electronic address: heberlefa@ornl.gov.
Richard L KingstonSchool of Biological Sciences, The University of Auckland, Auckland, New Zealand.
George KhelashviliDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, New York.
Michel A CuendetDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, New York.
Yi WenDepartment of Biochemistry and Molecular Cell Biology, Cornell University, Ithaca, New York.
John KatsarasThe Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, Knoxville, Tennessee; Biology and Soft Matter Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee; Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee; Shull Wollan Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee.
Gerald W FeigensonDepartment of Biochemistry and Molecular Cell Biology, Cornell University, Ithaca, New York.
Volker M VogtDepartment of Biochemistry and Molecular Cell Biology, Cornell University, Ithaca, New York.
Robert A DickDepartment of Biochemistry and Molecular Cell Biology, Cornell University, Ithaca, New York. Electronic address: rad82@cornell.edu.
Cornell University · USOak Ridge National Laboratory · USTri-Institutional PhD Program in Chemical Biology · USUniversity of Auckland · NZUniversity of Tennessee at Knoxville · US

Funding

Structure and Assembly of RetrovirusesR01GM107013 · NIGMS · CORNELL UNIVERSITY · PI VOGT, VOLKER M. · 2013 to 2018
$1.5M
Control of Retrovirus Assembly by Membrane Lipid Thermodynamic Activity.R01GM105684 · NIGMS · CORNELL UNIVERSITY · PI FEIGENSON, GERALD WILLIAM · 2013 to 2016
$1.2M
Structure and Assembly of RetrovirusesR01AI150454 · NIAID · CORNELL UNIVERSITY · PI VOGT, VOLKER M. · 2019 to 2020
$719k
NIAID NIH HHS R01 AI150454NIGMS NIH HHS R01 GM105684NIGMS NIH HHS R01 GM107013
6 · The paper itself

Abstract

Binding of the retroviral structural protein Gag to the cellular plasma membrane is mediated by the protein's matrix (MA) domain. Prominent among MA-PM interactions is electrostatic attraction between the positively charged MA domain and the negatively charged plasma membrane inner leaflet. Previously, we reported that membrane association of HIV-1 Gag, as well as purified Rous sarcoma virus (RSV) MA and Gag, depends strongly on the presence of acidic lipids and is enhanced by cholesterol (Chol). The mechanism underlying this enhancement was unclear. Here, using a broad set of in vitro and in silico techniques we addressed molecular mechanisms of association between RSV MA and model membranes, and investigated how Chol enhances this association. In neutron scattering experiments with liposomes in the presence or absence of Chol, MA preferentially interacted with preexisting POPS-rich clusters formed by nonideal lipid mixing, binding peripherally to the lipid headgroups with minimal perturbation to the bilayer structure. Molecular dynamics simulations showed a stronger MA-bilayer interaction in the presence of Chol, and a large Chol-driven increase in lipid packing and membrane surface charge density. Although in vitro MA-liposome association is influenced by disparate variables, including ionic strength and concentrations of Chol and charged lipids, continuum electrostatic theory revealed an underlying dependence on membrane surface potential. Together, these results conclusively show that Chol affects RSV MA-membrane association by making the electrostatic potential at the membrane surface more negative, while decreasing the penalty for lipid headgroup desolvation. The presented approach can be applied to other viral and nonviral proteins.

Indexed as

Static ElectricityAnimalsCell MembraneCholesterolLipid BilayersMolecular Dynamics SimulationPhosphatidylcholinesPhosphatidylserinesProtein BindingProtein ConformationProtein DomainsRetroviridae ProteinsRous sarcoma virusSolvents1-palmitoyl-2-oleoylglycero-3-phosphoserine1-palmitoyl-2-oleoylphosphatidylcholineCholesterolLipid BilayersPhosphatidylcholinesPhosphatidylserinesRetroviridae ProteinsSolvents

Identifiers

PMID29117524
PMCPMC5685651
OpenAlexW2767856283

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.