Evidence map›Paper›PMID 29117193›Full record

ArticlePloS one2017

Immunohistochemical analysis of PDK1, PHD3 and HIF-1α expression defines the hypoxic status of neuroblastoma tumors.

Marzia Ognibene, Davide Cangelosi, Martina Morini, Daniela Segalerba, Maria Carla Bosco, Angela Rita Sementa, Alessandra Eva, Luigi Varesio

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Targeted therapies in pediatric oncology: A start.Molecular therapy. Oncology · 2026
    Review
  2. Article
  3. Review
  4. Article
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  11. Hypoxia in the Initiation and Progression of Neuroblastoma Tumours.International journal of molecular sciences · 2019
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Marzia OgnibeneLaboratory of Molecular Biology, Giannina Gaslini Institute, Genova, Italy.ORCID http://orcid.org/0000-0003-3698-9319
Davide CangelosiLaboratory of Molecular Biology, Giannina Gaslini Institute, Genova, Italy.
Martina MoriniLaboratory of Molecular Biology, Giannina Gaslini Institute, Genova, Italy.
Daniela SegalerbaLaboratory of Molecular Biology, Giannina Gaslini Institute, Genova, Italy.
Maria Carla BoscoLaboratory of Molecular Biology, Giannina Gaslini Institute, Genova, Italy.
Angela Rita SementaDepartment of Pathology, Giannina Gaslini Institute, Genova, Italy.
Alessandra EvaLaboratory of Molecular Biology, Giannina Gaslini Institute, Genova, Italy.
Luigi VaresioLaboratory of Molecular Biology, Giannina Gaslini Institute, Genova, Italy.
Istituto Giannina Gaslini · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neuroblastoma (NB) is the most common solid tumor during infancy and the first cause of death among the preschool age diseases. The availability of several NB genomic profiles improves the prognostic ability, but the outcome prediction for this pathology remains imperfect. We previously produced a novel prognostic gene signature based on the response of NB cells to hypoxia, a condition of tumor microenvironment strictly connected with cancer aggressiveness. Here we attempted to further define the expression of hypoxia-modulated specific genes, looking at their protein level in NB specimens, considering in particular the hypoxia inducible factor-1α (HIF-1α), the mitochondrial pyruvate dehydrogenase kinase 1 (PDK1), and the HIF-prolyl hydroxylase domain 3 (PHD3). The evaluation of expression was performed by Western blot and immunocytochemistry on NB cell lines and by immunohistochemistry on tumor specimens. Stimulation of both HIF-1α and PDK1 and inhibition of PHD3 expression were observed in NB cell lines cultured under prolonged hypoxic conditions as well as in most of the tumors with poor outcome. Our results indicate that the immunohistochemistry analysis of the protein expression of PDK1, PHD3, and HIF-1α defines the hypoxic status of NB tumors and can be used as a simple and relevant tool to stratify high-risk patients.

Indexed as

Biomarkers, TumorCell HypoxiaCell Line, TumorChildChild, PreschoolFemaleGene Expression Regulation, NeoplasticHumansHypoxia-Inducible Factor 1, alpha SubunitHypoxia-Inducible Factor-Proline DioxygenasesImmunohistochemistryInfantMaleNeuroblastomaN-Myc Proto-Oncogene ProteinOxygenBiomarkers, TumorEGLN3 protein, humanHypoxia-Inducible Factor 1, alpha SubunitHypoxia-Inducible Factor-Proline DioxygenasesMYCN protein, humanN-Myc Proto-Oncogene ProteinOxygenPDK1 protein, humanProtein Serine-Threonine KinasesPyruvate Dehydrogenase Acetyl-Transferring Kinase

Identifiers

PMID29117193
PMCPMC5678880
OpenAlexW2768061374

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.