Evidence map›Paper›PMID 29116204›Full record

ArticleScientific reports2017

Tuberculosis in Swiss captive Asian elephants: microevolution of Mycobacterium tuberculosis characterized by multilocus variable-number tandem-repeat analysis and whole-genome sequencing.

Giovanni Ghielmetti, Mireia Coscolla, Maja Ruetten, Ute Friedel, Chloé Loiseau, Julia Feldmann, Hanspeter W Steinmetz, David Stucki, Sebastien Gagneux

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 2 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 2 syntheses or guidelines pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Microorganisms · 2020
    Review
  8. Iron Regulation in Elderly Asian Elephants (Frontiers in veterinary science · 2020
    Article
  9. Article
  10. Whole-Genome Sequencing for Drug Resistance Profile Prediction inAntimicrobial agents and chemotherapy · 2019
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Giovanni GhielmettiInstitute of Veterinary Bacteriology, University of Zurich, CH-8057, Zurich, Switzerland. giovanni.ghielmetti@vetbakt.uzh.ch.
Mireia CoscollaSwiss Tropical and Public Health Institute, CH-4002, Basel, Switzerland.
Maja RuettenInstitute of Veterinary Pathology, University of Zurich, CH-8057, Zurich, Switzerland.
Ute FriedelInstitute of Veterinary Bacteriology, University of Zurich, CH-8057, Zurich, Switzerland.
Chloé LoiseauSwiss Tropical and Public Health Institute, CH-4002, Basel, Switzerland.ORCID 0000-0003-4889-2784
Julia FeldmannSwiss Tropical and Public Health Institute, CH-4002, Basel, Switzerland.
Hanspeter W SteinmetzInstitute of Veterinary Bacteriology, University of Zurich, CH-8057, Zurich, Switzerland.
David StuckiSwiss Tropical and Public Health Institute, CH-4002, Basel, Switzerland.
Sebastien GagneuxSwiss Tropical and Public Health Institute, CH-4002, Basel, Switzerland.
Swiss Tropical and Public Health Institute · CHUniversity of Zurich · CH

Funding

European Research Council 309540
6 · The paper itself

Abstract

Zoonotic tuberculosis is a risk for human health, especially when animals are in close contact with humans. Mycobacterium tuberculosis was cultured from several organs, including lung tissue and gastric mucosa, of three captive elephants euthanized in a Swiss zoo. The elephants presented weight loss, weakness and exercise intolerance. Molecular characterization of the M. tuberculosis isolates by spoligotyping revealed an identical profile, suggesting a single source of infection. Multilocus variable-number of tandem-repeat analysis (MLVA) elucidated two divergent populations of bacteria and mixed infection in one elephant, suggesting either different transmission chains or prolonged infection over time. A total of eight M. tuberculosis isolates were subjected to whole-genome sequence (WGS) analysis, confirming a single source of infection and indicating the route of transmission between the three animals. Our findings also show that the methods currently used for epidemiological investigations of M. tuberculosis infections should be carefully applied on isolates from elephants. Moreover the importance of multiple sampling and analysis of within-host mycobacterial clonal populations for investigations of transmission is demonstrated.

Indexed as

Minisatellite RepeatsAnimalsDiagnostic Tests, RoutineDisease OutbreaksElephantsMultilocus Sequence TypingMycobacterium tuberculosisSwitzerlandTuberculosisWhole Genome Sequencing

Identifiers

PMID29116204
PMCPMC5676744
OpenAlexW2765961882

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.