Evidence map›Paper›PMID 29116156›Full record

ArticleScientific reports2017

Efficient production and characterization of the novel and highly active antifungal protein AfpB from Penicillium digitatum.

Sandra Garrigues, Mónica Gandía, Crina Popa, Attila Borics, Florentine Marx, María Coca, Jose F Marcos, Paloma Manzanares

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 65 citations in OpenAlex.

  1. Morphotype-specific susceptibility toMicrobiology spectrum · 2026
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  7. Review
  8. Heterologous protein production in filamentous fungi.Applied microbiology and biotechnology · 2023
    Review
  9. Article
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  11. TheMicroorganisms · 2023
    Article
  12. Article
  13. Special Issue "Control of Postharvest PathogenicJournal of fungi (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Article
  16. Deciphering Molecular Determinants UnderlyingInternational journal of molecular sciences · 2022
    Article
  17. Review
  18. Review
  19. Review
  20. Potential of Antifungal Proteins (AFPs) to ControlJournal of fungi (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Sandra GarriguesDepartment of Biotechnology, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Paterna, Valencia, Spain.
Mónica GandíaDepartment of Biotechnology, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Paterna, Valencia, Spain.
Crina PopaCentre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB. Edifici CRAG, Bellaterra, Barcelona, Spain.
Attila BoricsInstitute of Biochemistry, Biological Research Centre of Hungarian Academy of Sciences, Szeged, Hungary.
Florentine MarxBiocenter, Division of Molecular Biology, Medical University of Innsbruck, Innsbruck, Austria.ORCID 0000-0002-8408-1842
María CocaCentre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB. Edifici CRAG, Bellaterra, Barcelona, Spain.
Jose F MarcosDepartment of Biotechnology, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Paterna, Valencia, Spain.ORCID 0000-0003-3339-2584
Paloma ManzanaresDepartment of Biotechnology, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Paterna, Valencia, Spain. pmanz@iata.csic.es.
Consejo Superior de Investigaciones Científicas · ESCenter for Research in Agricultural Genomics · ESHUN-REN Szegedi Biológiai Kutatóközpont · HUInnsbruck Medical University · AT

Funding

Austrian Science Fund FWF I 1644
6 · The paper itself

Abstract

Filamentous fungi encode distinct antifungal proteins (AFPs) that offer great potential to develop new antifungals. Fungi are considered immune to their own AFPs as occurs in Penicillium chrysogenum, the producer of the well-known PAF. The Penicillium digitatum genome encodes only one afp gene (afpB), and the corresponding protein (AfpB) belongs to the class B phylogenetic cluster. Previous attempts to detect AfpB were not successful. In this work, immunodetection confirmed the absence of AfpB accumulation in wild type and previous recombinant constitutive P. digitatum strains. Biotechnological production and secretion of AfpB were achieved in P. digitatum with the use of a P. chrysogenum-based expression cassette and in the yeast Pichia pastoris with the α-factor signal peptide. Both strategies allowed proper protein folding, efficient production and single-step purification of AfpB from culture supernatants. AfpB showed antifungal activity higher than the P. chrysogenum PAF against the majority of the fungi tested, especially against Penicillium species and including P. digitatum, which was highly sensitive to the self-AfpB. Spectroscopic data suggest that native folding is not required for activity. AfpB also showed notable ability to withstand protease and thermal degradation and no haemolytic activity, making AfpB a promising candidate for the control of pathogenic fungi.

Indexed as

Antifungal AgentsBacterial ProteinsBlotting, WesternChromatography, Ion ExchangeCircular DichroismElectrophoresis, Polyacrylamide GelMass SpectrometryMicrobial Sensitivity TestsOrganisms, Genetically ModifiedPenicilliumRecombinant ProteinsAntifungal AgentsBacterial ProteinsRecombinant Proteins

Identifiers

PMID29116156
PMCPMC5677034
OpenAlexW2766214997

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.