Evidence map›Paper›PMID 29116131›Full record

ArticleScientific reports2017

Context-dependent compensation among phosphatidylserine-recognition receptors.

Kristen K Penberthy, Claudia Rival, Laura S Shankman, Michael H Raymond, Jianye Zhang, Justin S A Perry, Chang Sup Lee, Claudia Z Han, Suna Onengut-Gumuscu, Krzysztof Palczewski and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Efferocytosis in Homeostasis.Advances in experimental medicine and biology · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Determining the effector response to cell death.Nature reviews. Immunology · 2021
    Review
  16. Article
  17. The cell biology of the retinal pigment epithelium.Progress in retinal and eye research · 2020
    Review
  18. Article
  19. Review
  20. Immune cells and CNS physiology: Microglia and beyond.The Journal of experimental medicine · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Kristen K PenberthyCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA.
Claudia RivalCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA.
Laura S ShankmanCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA.
Michael H RaymondCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA.
Jianye ZhangDepartment of Pharmacology and Cleveland Center for Membrane and Structural Biology, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Justin S A PerryCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA.
Chang Sup LeeCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA.
Claudia Z HanCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA.
Suna Onengut-GumuscuCenter for Public Health Genomics, University of Virginia, Charlottesville, VA, USA.
Krzysztof PalczewskiDepartment of Pharmacology and Cleveland Center for Membrane and Structural Biology, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Jeffrey J LysiakCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA.
Kodi S RavichandranCenter for Cell Clearance, University of Virginia, Charlottesville, VA, USA. ravi@virginia.edu.
University of Virginia · USCase Western Reserve University · USGhent University · BEGyeongsang National University · KR

Funding

Role of Pannexins in Vascular Smooth Muscle CellsP01HL120840 · NHLBI · UNIVERSITY OF VIRGINIA · PI ISAKSON, BRANT E · 2014 to 2023
$24.0M
Cancer Research Training Program: From Molecular Mechanisms to Therapeutic StrategiesT32CA009109 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Andrew Carl Dudley, Melanie R Rutkowski · 1985 to 2026
$13.9M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007267 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI GARCIA-BLANCO, MARIANO A. · 1985 to 2024
$13.4M
INTERDISCIPLINARY TRAINING PROGRAM IN IMMUNOLOGYT32AI007496 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Michael G. Brown, Coleen A McNamara · 1995 to 2026
$10.2M
TRAINING IN CELL AND MOLECULAR BIOLOGYT32GM008136 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI STUKENBERG, P. TODD · 1985 to 2020
$8.5M
Role of ELMO and DOCK 180 in signaling to engulfmentR01GM064709 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI LORENZ, ULRIKE, RAVICHANDRAN, KODI S · 2003 to 2016
$3.6M
Mechanisms regulating apoptotic cell clearance in health and diseaseR35GM122542 · NIGMS · WASHINGTON UNIVERSITY · PI RAVICHANDRAN, KODI S · 2017 to 2021
$2.3M
Cell Clearance in Urogenital TractR01HD074981 · NICHD · UNIVERSITY OF VIRGINIA · PI LYSIAK, JEFFREY J, RAVICHANDRAN, KODI S · 2013 to 2017
$1.6M
MBF Bioscience and Zeiss Microscope System for Stereology and Tissue MorphologyS10RR026799 · NCRR · UNIVERSITY OF VIRGINIA · PI OKUSA, MARK DOUGLAS · 2010 to 2010
$278k
Role of the PP2A-FoxO1 Axis in Treg Function and Allergic Airway InflammationF30HL126385 · NHLBI · UNIVERSITY OF VIRGINIA · PI PENBERTHY, KRISTEN KELLEY · 2015 to 2018
$122k
NCI NIH HHS T32 CA009109NCRR NIH HHS S10 RR026799NHLBI NIH HHS F30 HL126385NHLBI NIH HHS P01 HL120840NIAID NIH HHS T32 AI007496NICHD NIH HHS R01 HD074981NIGMS NIH HHS R01 GM064709NIGMS NIH HHS R35 GM122542NIGMS NIH HHS T32 GM008136
6 · The paper itself

Abstract

Phagocytes express multiple phosphatidylserine (PtdSer) receptors that recognize apoptotic cells. It is unknown whether these receptors are interchangeable or if they play unique roles during cell clearance. Loss of the PtdSer receptor Mertk is associated with apoptotic corpse accumulation in the testes and degeneration of photoreceptors in the eye. Both phenotypes are linked to impaired phagocytosis by specialized phagocytes: Sertoli cells and the retinal pigmented epithelium (RPE). Here, we overexpressed the PtdSer receptor BAI1 in mice lacking MerTK (Mertk

Indexed as

ApoptosisPhagocytosisAngiogenic ProteinsAnimalsc-Mer Tyrosine KinaseGerm CellsHumansMaleMiceMice, KnockoutRetinal Pigment EpitheliumSertoli CellsAdgrb1 protein, mouseAngiogenic Proteinsc-Mer Tyrosine KinaseMertk protein, mouse

Identifiers

PMID29116131
PMCPMC5676788
OpenAlexW2767021156

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.