Evidence map›Paper›PMID 29116127›Full record

ArticleScientific reports2017

Plasmodium falciparum parasites with histidine-rich protein 2 (pfhrp2) and pfhrp3 gene deletions in two endemic regions of Kenya.

Khalid B Beshir, Nuno Sepúlveda, Jameel Bharmal, Ailie Robinson, Julian Mwanguzi, Annette Obukosia Busula, Jetske Gudrun de Boer, Colin Sutherland, Jane Cunningham, Heidi Hopkins

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed, 6 pooled it
15.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 6 syntheses or guidelines pooled it, 163 citations in OpenAlex.

  1. Pooled it
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  5. Prevalence ofBulletin of the World Health Organization · 2020
    Pooled it
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  7. Trial
  8. Article
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  10. Tropical medicine and infectious disease · 2026
    Article
  11. Malaria control and the unexpected spread of diagnostic-resistantbioRxiv : the preprint server for biology · 2026
    Article
  12. Local variability inMalariaWorld journal · 2026
    Article
  13. Article
  14. Low prevalence ofFrontiers in epidemiology · 2026
    Article
  15. Article
  16. Article
  17. Article
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35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 5 countries.

Khalid B BeshirLondon School of Hygiene and Tropical Medicine, London, UK. Khalid.Beshir@lshtm.ac.uk.
Nuno SepúlvedaLondon School of Hygiene and Tropical Medicine, London, UK.
Jameel BharmalLondon School of Hygiene and Tropical Medicine, London, UK.
Ailie RobinsonLondon School of Hygiene and Tropical Medicine, London, UK.
Julian MwanguziLondon School of Hygiene and Tropical Medicine, London, UK.
Annette Obukosia BusulaInternational Centre of Insect Physiology and Ecology, Nairobi, Kenya.
Jetske Gudrun de BoerLaboratory of Entomology, Wageningen University, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands.
Colin SutherlandLondon School of Hygiene and Tropical Medicine, London, UK.ORCID 0000-0003-1592-6407
Jane CunninghamGlobal Malaria Programme, World Health Organization (WHO-GMP), Geneva, Switzerland.
Heidi HopkinsLondon School of Hygiene and Tropical Medicine, London, UK.
London School of Hygiene & Tropical Medicine · GBInternational Centre of Insect Physiology and Ecology · KENetherlands Institute of Ecology · NLUniversity of Lisbon · PTWorld Health Organization · CH

Funding

World Health Organization 001
6 · The paper itself

Abstract

Deletions of the Plasmodium falciparum hrp2 and hrp3 genes can affect the performance of HRP2-based malaria rapid diagnostic tests (RDTs). Such deletions have been reported from South America, India and Eritrea. Whether these parasites are widespread in East Africa is unknown. A total of 274 samples from asymptomatic children in Mbita, western Kenya, and 61 genomic  data from Kilifi, eastern Kenya, were available for analysis. PCR-confirmed samples were investigated for the presence of pfhrp2 and pfhrp3 genes. In samples with evidence of deletion, parasite presence was confirmed by amplifying three independent genes. We failed to amplify pfhrp2 from 25 of 131 (19.1%) PCR-confirmed samples. Of these, only 8 (10%) samples were microscopic positive and were classified as pfhrp2-deleted. Eight microscopically-confirmed pfhrp2-deleted samples with intact pfhrp3 locus were positive by HRP2-based RDT. In addition, one PCR-confirmed infection showed a deletion at the pfhrp3 locus. One genomic sample lacked pfhrp2 and one lacked pfhrp3. No sample harbored parasites lacking both genes. Parasites lacking pfhrp2 are present in Kenya, but may be detectable by HRP-based RDT at higher parasitaemia, possibly due to the presence of intact pfhrp3. These findings warrant further systematic study to establish prevalence and diagnostic significance.

Indexed as

Endemic DiseasesGene DeletionAntigens, ProtozoanCross-Sectional StudiesGenes, ProtozoanHumansKenyaMalaria, FalciparumPlasmodium falciparumPolymerase Chain ReactionProtozoan ProteinsAntigens, ProtozoanHRP-2 antigen, Plasmodium falciparumHRP3 protein, Plasmodium falciparumProtozoan Proteins

Identifiers

PMID29116127
PMCPMC5677122
OpenAlexW2765380972

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.