Evidence map›Paper›PMID 29116080›Full record

ArticleNature communications2017

Structural basis for high-affinity actin binding revealed by a β-III-spectrin SCA5 missense mutation.

Adam W Avery, Michael E Fealey, Fengbin Wang, Albina Orlova, Andrew R Thompson, David D Thomas, Thomas S Hays, Edward H Egelman

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 69 citations in OpenAlex.

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  17. Structural mechanism for bidirectional actin cross-linking by T-plastin.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. International journal of molecular sciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Adam W AveryDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN, 55455, USA.
Michael E FealeyDepartment of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, 55455, USA.ORCID http://orcid.org/0000-0002-1264-8037
Fengbin WangDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, 22908, USA.ORCID http://orcid.org/0000-0003-1008-663X
Albina OrlovaDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, 22908, USA.
Andrew R ThompsonDepartment of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, 55455, USA.ORCID http://orcid.org/0000-0001-8537-6776
David D ThomasDepartment of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, 55455, USA.ORCID http://orcid.org/0000-0002-8822-2040
Thomas S HaysDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN, 55455, USA. haysx001@umn.edu.
Edward H EgelmanDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, 22908, USA.ORCID http://orcid.org/0000-0003-4844-5212
University of Minnesota · USUniversity of Virginia · US

Funding

Women's Oncology Program - WONP30CA044579 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Thomas P. Loughran · 1987 to 2026
$72.1M
TRAINING PROGRAM IN MUSCLE RESEARCHT32AR007612 · NIAMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI JAMES M ERVASTI, DAWN A LOWE · 2001 to 2026
$11.3M
Cryo-EM of Helical Protein and Nucleoprotein Polymers at Near Atomic ResolutionR35GM122510 · NIGMS · UNIVERSITY OF VIRGINIA · PI EDWARD H. EGELMAN · 2017 to 2026
$7.3M
STRUCTURE AND FUNCTION OF CYTOPLASMIC DYNEINR01GM044757 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI HAYS, THOMAS S · 1990 to 2022
$5.7M
Site-Directed Oxidative Modification of Muscle Protein Structural DynamicsR37AG026160 · NIA · UNIVERSITY OF MINNESOTA · PI THOMAS, DAVID D · 2011 to 2020
$4.5M
Structural Studies of ActinR01GM081303 · NIGMS · UNIVERSITY OF VIRGINIA · PI EGELMAN, EDWARD H. · 2007 to 2016
$3.6M
Molecular Electron Microscopy Core Facility ImprovementsG20RR031199 · NCRR · UNIVERSITY OF VIRGINIA · PI SHUPNIK, MARGARET A · 2010 to 2010
$2.0M
300 keV Liquid Helium Robotic MicroscopeS10RR025067 · NCRR · UNIVERSITY OF VIRGINIA · PI EGELMAN, EDWARD H. · 2009 to 2009
$2.0M
Spectroscopic Probes of the Muscle CytoskeletonR01AR063007 · NIAMS · UNIVERSITY OF MINNESOTA · PI THOMAS, DAVID D · 2012 to 2015
$1.3M
Direct Electron Detector for a Titan Krios Robotic Electron Cryo-MicroscopeS10OD018149 · OD · UNIVERSITY OF VIRGINIA · PI EGELMAN, EDWARD H., YEAGER, MARK JAY · 2014 to 2014
$500k
Structure and Function of Cytoplasmic DyneinR56GM044757 · NIGMS · UNIVERSITY OF MINNESOTA · PI HAYS, THOMAS S · 2008 to 2008
$490k
NCI NIH HHS P30 CA044579NCRR NIH HHS G20 RR031199NCRR NIH HHS S10 RR025067NIAMS NIH HHS R01 AR063007NIAMS NIH HHS T32 AR007612NIA NIH HHS R37 AG026160NIGMS NIH HHS R01 GM044757NIGMS NIH HHS R01 GM081303NIGMS NIH HHS R35 GM122510NIGMS NIH HHS R56 GM044757NIH HHS S10 OD018149
6 · The paper itself

Abstract

Spinocerebellar ataxia type 5 (SCA5) is a neurodegenerative disease caused by mutations in the cytoskeletal protein β-III-spectrin. Previously, a SCA5 mutation resulting in a leucine-to-proline substitution (L253P) in the actin-binding domain (ABD) was shown to cause a 1000-fold increase in actin-binding affinity. However, the structural basis for this increase is unknown. Here, we report a 6.9 Å cryo-EM structure of F-actin complexed with the L253P ABD. This structure, along with co-sedimentation and pulsed-EPR measurements, demonstrates that high-affinity binding caused by the CH2-localized mutation is due to opening of the two CH domains. This enables CH1 to bind actin aided by an unstructured N-terminal region that becomes α-helical upon binding. This helix is required for association with actin as truncation eliminates binding. Collectively, these results shed light on the mechanism by which β-III-spectrin, and likely similar actin-binding proteins, interact with actin, and how this mechanism can be perturbed to cause disease.

Indexed as

Mutation, MissenseActinsBinding SitesCryoelectron MicroscopyElectron Spin Resonance SpectroscopyHumansModels, MolecularProtein ConformationProtein DomainsSpectrinActinsSpectrinSPTBN2 protein, human

Identifiers

PMID29116080
PMCPMC5676748
OpenAlexW2766915562

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.