Evidence map›Paper›PMID 29115293›Full record

ArticleNature materials2018

Intracellular production of hydrogels and synthetic RNA granules by multivalent molecular interactions.

Hideki Nakamura, Albert A Lee, Ali Sobhi Afshar, Shigeki Watanabe, Elmer Rho, Shiva Razavi, Allister Suarez, Yu-Chun Lin, Makoto Tanigawa, Brian Huang and 6 more

Abstract read
In one paragraph

Article in Nature materials, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Chemical reviews · 2026
    Review
  5. Article
  6. Article
  7. Stimuli-triggered formation ofCell biomaterials · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Hideki NakamuraDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Albert A LeeDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Ali Sobhi AfsharCenter for Imaging Science, Whitaker Biomedical Engineering Institute, Johns Hopkins University, Baltimore, Maryland 21218, USA.
Shigeki WatanabeDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Elmer RhoCenter for Cell Dynamics, Institute for Basic Biomedical Sciences, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Shiva RazaviDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Allister SuarezDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Yu-Chun LinDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Makoto TanigawaDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Brian HuangCenter for Cell Dynamics, Institute for Basic Biomedical Sciences, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Robert DeRoseDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Diana BobbDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
William HongDepartment of Biophysics and Biophysical Chemistry, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.
Sandra B GabelliDepartment of Biophysics and Biophysical Chemistry, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.ORCID 0000-0003-1205-5204
John GoutsiasCenter for Imaging Science, Whitaker Biomedical Engineering Institute, Johns Hopkins University, Baltimore, Maryland 21218, USA.
Takanari InoueDepartment of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21205, USA.

Funding

Tumor Antigens for Individual Signatures and TherapyP50CA062924 · NCI · JOHNS HOPKINS UNIVERSITY · PI LENNON, ANNE MARIE · 1993 to 2022
$54.6M
BIOCHEMISTRY, CELLULAR AND MOLECULAR BIOLOGY PROGRAMT32GM007445 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GREEN, RACHEL · 1985 to 2021
$24.1M
Theranostic Imaging of Metastatic Prostate CancerP50CA103175 · NCI · JOHNS HOPKINS UNIVERSITY · PI BARKER, PETER B · 2003 to 2015
$17.9M
Translational Research Enhancement CoreP30DK089502 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI ZACHOS, NICHOLAS CONSTANTINE · 2011 to 2020
$12.0M
Feedback and Crosstalk in Eukaryotic Chemotaxis- Administrative SupplementR01GM092930 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI INOUE, TAKANARI · 2010 to 2015
$1.6M
Flow sensation by kidney cellsR01DK102910 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI INOUE, TAKANARI · 2014 to 2017
$1.6M
NCI NIH HHS P50 CA062924NCI NIH HHS P50 CA103175NIDDK NIH HHS P30 DK089502NIDDK NIH HHS R01 DK102910NIGMS NIH HHS R01 GM092930NIGMS NIH HHS T32 GM007445
6 · The paper itself

Abstract

Some protein components of intracellular non-membrane-bound entities, such as RNA granules, are known to form hydrogels in vitro. The physico-chemical properties and functional role of these intracellular hydrogels are difficult to study, primarily due to technical challenges in probing these materials in situ. Here, we present iPOLYMER, a strategy for a rapid induction of protein-based hydrogels inside living cells that explores the chemically inducible dimerization paradigm. Biochemical and biophysical characterizations aided by computational modelling show that the polymer network formed in the cytosol resembles a physiological hydrogel-like entity that acts as a size-dependent molecular sieve. We functionalize these polymers with RNA-binding motifs that sequester polyadenine-containing nucleotides to synthetically mimic RNA granules. These results show that iPOLYMER can be used to synthetically reconstitute the nucleation of biologically functional entities, including RNA granules in intact cells.

Indexed as

AnimalsBiocompatible MaterialsChlorocebus aethiopsCOS CellsHydrogelsPolymersRNABiocompatible MaterialsHydrogelsPolymersRNA

Identifiers

PMID29115293
PMCPMC5916848

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.