Evidence map›Paper›PMID 29114052›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

DNA damage response protein TOPBP1 regulates X chromosome silencing in the mammalian germ line.

Elias ElInati, Helen R Russell, Obah A Ojarikre, Mahesh Sangrithi, Takayuki Hirota, Dirk G de Rooij, Peter J McKinnon, James M A Turner

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 63 citations in OpenAlex.

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  5. mAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
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  15. Sex body: A nest of protein mixture.Frontiers in cell and developmental biology · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Elias ElInatiSex Chromosome Biology Laboratory, The Francis Crick Institute, London NW1 1AT, United Kingdom.
Helen R RussellDepartment of Genetics, St. Jude Children's Research Hospital, Memphis, TN 38105.
Obah A OjarikreSex Chromosome Biology Laboratory, The Francis Crick Institute, London NW1 1AT, United Kingdom.
Mahesh SangrithiDepartment of Reproductive Medicine, KK Women's and Children's Hospital, 229899 Singapore.
Takayuki HirotaSex Chromosome Biology Laboratory, The Francis Crick Institute, London NW1 1AT, United Kingdom.
Dirk G de RooijReproductive Biology Group, Division of Developmental Biology, Department of Biology, Faculty of Science, Utrecht University, 3584 CH Utrecht, The Netherlands.
Peter J McKinnonDepartment of Genetics, St. Jude Children's Research Hospital, Memphis, TN 38105.
James M A TurnerSex Chromosome Biology Laboratory, The Francis Crick Institute, London NW1 1AT, United Kingdom; james.turner@crick.ac.uk.ORCID 0000-0003-1722-7677
The Francis Crick Institute · GBSt. Jude Children's Research Hospital · USKK Women's and Children's Hospital · SGUtrecht University · NL

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
The DNA Damage Response and Tumorigenesis in the BrainP01CA096832 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BAKER, SUZANNE J. · 2003 to 2025
$38.0M
ATM and DNA Damage in the Nervous SystemR01NS037956 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MCKINNON, PETER J · 1998 to 2022
$7.6M
ATM and DNA Damage in the Nervous SystemR56NS037956 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MCKINNON, PETER J · 2007 to 2007
$413k
Cancer Research UK FC001193Medical Research Council FC001193NCI NIH HHS P01 CA096832NCI NIH HHS P30 CA021765NINDS NIH HHS R01 NS037956NINDS NIH HHS R56 NS037956Wellcome TrustWellcome Trust FC001193
6 · The paper itself

Abstract

Meiotic synapsis and recombination between homologs permits the formation of cross-overs that are essential for generating chromosomally balanced sperm and eggs. In mammals, surveillance mechanisms eliminate meiotic cells with defective synapsis, thereby minimizing transmission of aneuploidy. One such surveillance mechanism is meiotic silencing, the inactivation of genes located on asynapsed chromosomes, via ATR-dependent serine-139 phosphorylation of histone H2AFX (γH2AFX). Stimulation of ATR activity requires direct interaction with an ATR activation domain (AAD)-containing partner. However, which partner facilitates the meiotic silencing properties of ATR is unknown. Focusing on the best-characterized example of meiotic silencing, meiotic sex chromosome inactivation, we reveal this AAD-containing partner to be the DNA damage and checkpoint protein TOPBP1. Conditional TOPBP1 deletion during pachynema causes germ cell elimination associated with defective X chromosome gene silencing and sex chromosome condensation. TOPBP1 is essential for localization to the X chromosome of silencing "sensors," including BRCA1, and effectors, including ATR, γH2AFX, and canonical repressive histone marks. We present evidence that persistent DNA double-strand breaks act as silencing initiation sites. Our study identifies TOPBP1 as a critical factor in meiotic sex chromosome silencing.

Indexed as

DNA Breaks, Double-StrandedX Chromosome InactivationAnimalsAtaxia Telangiectasia Mutated ProteinsBRCA1 ProteinCarrier ProteinsChromosome PairingHistonesMaleMiceMice, KnockoutSex ChromosomesSpermatidsSpermatocytesSpermatogenesisSpermatogoniaAtaxia Telangiectasia Mutated ProteinsAtr protein, mouseBRCA1 ProteinBrca1 protein, mouseCarrier Proteinsgamma-H2AX protein, mouseHistonesTopbp1 protein, mouseTumor Suppressor ProteinsDNA damagemeiosismeiotic silencingspermatogenesisTOPBP1

Identifiers

PMID29114052
PMCPMC5703310
OpenAlexW2767495659

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.