Evidence map›Paper›PMID 29113733›Full record

ArticleJournal of virological methods2018

Development and evaluation of a novel real-time RT-PCR to detect foot-and-mouth disease viruses from the emerging A/ASIA/G-VII lineage.

Meruyert A Saduakassova, Akhmetzhan A Sultanov, Lespek B Kutumbetov, Jemma Wadsworth, Britta A Wood, Nick J Knowles, Donald P King, Katarzyna Bachanek-Bankowska

Open access · hybridAbstract readEvaluation Study
In one paragraph

Article in Journal of virological methods, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Meruyert A SaduakassovaKazakh Scientific Research Veterinary Institute, 223 Raimbek Avenue, Almaty, 050016, Kazakhstan.
Akhmetzhan A SultanovKazakh Scientific Research Veterinary Institute, 223 Raimbek Avenue, Almaty, 050016, Kazakhstan.
Lespek B KutumbetovKazakh Scientific Research Veterinary Institute, 223 Raimbek Avenue, Almaty, 050016, Kazakhstan.
Jemma WadsworthThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, GU24 0NF, United Kingdom.
Britta A WoodThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, GU24 0NF, United Kingdom.
Nick J KnowlesThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, GU24 0NF, United Kingdom.
Donald P KingThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, GU24 0NF, United Kingdom.
Katarzyna Bachanek-BankowskaThe Pirbright Institute, Ash Road, Pirbright, Woking, Surrey, GU24 0NF, United Kingdom. Electronic address: kasia.bankowska@pirbright.ac.uk.
The Pirbright Institute · GBKazakh Scientific Research Veterinary Institute · KZ

Funding

Biotechnology and Biological Sciences Research Council BB/E/I/00007017Biotechnology and Biological Sciences Research Council BBS/E/I/00007037
6 · The paper itself

Abstract

A new lineage of foot-and-mouth disease virus (FMDV), called A/ASIA/G-VII, emerged from the Indian subcontinent in 2015 and continues to spread in Western Asia. Currently, the distribution of viruses belonging to this lineage is defined using sequencing approaches, but other cheaper and faster diagnostic methods are urgently needed. Thus, this study describes the development and validation of a novel A/ASIA/G-VII lineage-specific real-time RT-PCR (rRT-PCR). Diagnostic sensitivity and specificity were evaluated using representative field specimens and isolates from the A/ASIA/G-VII lineage, as well as samples comprising other FMDV lineages that co-circulate in Asia (n=54). This lineage-specific assay accurately detected all A/ASIA/G-VII samples tested (n=29), and no detection was observed for samples belonging to other FMDV lineages (n=25), namely A/ASIA/Sea-97, A/ASIA/Iran-05

Indexed as

Real-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionAnimalsDisease OutbreaksFoot-and-Mouth DiseaseFoot-and-Mouth Disease VirusPhylogenyRNA, ViralSensitivity and SpecificitySequence Analysis, DNASerogroupRNA, ViralFMDVG-VII-lineage-specific assay

Identifiers

PMID29113733
PMCPMC5764150
OpenAlexW2766853883

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.