Evidence map›Paper›PMID 29113617›Full record

ArticleParasitology2018

Molecular detection of Cyclospora cayetanensis in human stool specimens using UNEX-based DNA extraction and real-time PCR.

Yvonne Qvarnstrom, Theresa Benedict, Paula L Marcet, Ryan E Wiegand, Barbara L Herwaldt, Alexandre J da Silva

Abstract read
In one paragraph

Article in Parasitology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

  1. SenescentMicroorganisms · 2026
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  10. A Pilot Comparison of Fixatives for Hookworm Real-time Polymerase Chain Reaction.The American journal of tropical medicine and hygiene · 2023
    Article
  11. Hastening Progress inMicroorganisms · 2022
    Article
  12. Article
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  14. Investigation of USEpidemiology and infection · 2021
    Article
  15. Detection ofFood and waterborne parasitology · 2021
    Article
  16. Article
  17. Protozoan infections are under-recognized in Swedish patients with gastrointestinal symptoms.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Yvonne QvarnstromDivision of Parasitic Diseases and Malaria,Center for Global Health, Centers for Disease Control and Prevention,1600 Clifton Rd, Atlanta, GA 30329,USA.ORCID 0000-0002-9466-6414
Theresa BenedictDivision of Parasitic Diseases and Malaria,Center for Global Health, Centers for Disease Control and Prevention,1600 Clifton Rd, Atlanta, GA 30329,USA.
Paula L MarcetDivision of Parasitic Diseases and Malaria,Center for Global Health, Centers for Disease Control and Prevention,1600 Clifton Rd, Atlanta, GA 30329,USA.
Ryan E WiegandDivision of Parasitic Diseases and Malaria,Center for Global Health, Centers for Disease Control and Prevention,1600 Clifton Rd, Atlanta, GA 30329,USA.
Barbara L HerwaldtDivision of Parasitic Diseases and Malaria,Center for Global Health, Centers for Disease Control and Prevention,1600 Clifton Rd, Atlanta, GA 30329,USA.
Alexandre J da SilvaOffice of Applied Research and Safety Assessment, Center for Food Safety and Applied Nutrition,U.S. Food and Drug Administration, 8301 Muirkirk Rd,Laurel, MD 20708,USA.
Centers for Disease Control and Prevention · USCenter for Food Safety and Applied Nutrition · US

Funding

Intramural CDC HHS CC999999
6 · The paper itself

Abstract

Cyclospora cayetanensis is a coccidian parasite associated with diarrheal illness. In the USA, foodborne outbreaks of cyclosporiasis have been documented almost every year since the mid-1990s. The typical approach used to identify this parasite in human stools is an examination of acid-fast-stained smears under bright-field microscopy. UV fluorescence microscopy of wet mounts is more sensitive and specific than acid-fast staining but requires a fluorescence microscope with a special filter not commonly available in diagnostic laboratories. In this study, we evaluated a new DNA extraction method based on the Universal Nucleic Acid Extraction (UNEX) buffer and compared the performances of four published real-time polymerase chain reaction (PCR) assays for the specific detection of C. cayetanensis in stool. The UNEX-based method had an improved capability to recover DNA from oocysts compared with the FastDNA stool extraction method. The best-performing real-time PCR assay was a C. cayetanensis-specific TaqMan PCR that targets the 18S ribosomal RNA gene. This new testing algorithm should be useful for detection of C. cayetanensis in human stool samples.

Indexed as

Real-Time Polymerase Chain ReactionCyclosporaCyclosporiasisDNA, ProtozoanFecesHumansMolecular Diagnostic TechniquesOocystsRNA, Ribosomal, 18SDNA, ProtozoanRNA, Ribosomal, 18ScoccidiaCyclospora cayetanensismolecular diagnosticsstool DNA extraction

Identifiers

PMID29113617
PMCPMC5940589
OpenAlexW2767711875

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.