Evidence map›Paper›PMID 29111672›Full record

ArticleBiochemistry2017

Deciphering Conformational Changes Associated with the Maturation of Thrombin Anion Binding Exosite I.

Ramya Billur, David Ban, T Michael Sabo, Muriel C Maurer

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ramya BillurDepartment of Chemistry, University of Louisville , Louisville, Kentucky 40292, United States.
David BanDepartment of Medicine, James Graham Brown Cancer Center, University of Louisville , Louisville, Kentucky 40202, United States.ORCID http://orcid.org/0000-0002-3153-3104
T Michael SaboDepartment of Medicine, James Graham Brown Cancer Center, University of Louisville , Louisville, Kentucky 40202, United States.ORCID http://orcid.org/0000-0002-9573-145X
Muriel C MaurerDepartment of Chemistry, University of Louisville , Louisville, Kentucky 40292, United States.ORCID http://orcid.org/0000-0002-7073-307X
University of Louisville · US

Funding

Factor Xlll Activation and Substrate SpecificityR01HL068440 · NHLBI · UNIVERSITY OF LOUISVILLE · PI MAURER, MURIEL C. · 2002 to 2010
$2.1M
Fibrin Clot Architecture Regulated by Factor XIIIR15HL120068 · NHLBI · UNIVERSITY OF LOUISVILLE · PI MAURER, MURIEL C. · 2013 to 2019
$1.3M
NHLBI NIH HHS R01 HL068440NHLBI NIH HHS R15 HL120068
6 · The paper itself

Abstract

Thrombin participates in procoagulation, anticoagulation, and platelet activation. This enzyme contains anion binding exosites, ABE I and ABE II, which attract regulatory biomolecules. As prothrombin is activated to thrombin, pro-ABE I is converted into mature ABE I. Unexpectedly, certain ligands can bind to pro-ABE I specifically. Moreover, knowledge of changes in conformation and affinity that occur at the individual residue level as pro-ABE I is converted to ABE I is lacking. Such changes are transient and were not captured by crystallography. Therefore, we employed nuclear magnetic resonance (NMR) titrations to monitor development of ABE I using peptides based on protease-activated receptor 3 (PAR3). Proton line broadening NMR revealed that PAR3 (44-56) and more weakly binding PAR3G (44-56) could already interact with pro-ABE I on prothrombin.

Indexed as

Amino Acid SequenceBinding SitesHumansMagnetic Resonance SpectroscopyProtein ConformationThrombinThrombin

Identifiers

PMID29111672
PMCPMC6076386
OpenAlexW2767895702

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.