Evidence map›Paper›PMID 29110131›Full record

ArticleBulletin of mathematical biology2018

What Controls the Acute Viral Infection Following Yellow Fever Vaccination?

James Moore, Hasan Ahmed, Jonathan Jia, Rama Akondy, Rafi Ahmed, Rustom Antia

Open access · greenAbstract read
In one paragraph

Article in Bulletin of mathematical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. When does humoral memory enhance infection?PLoS computational biology · 2023
    Article
  4. Article
  5. Article
  6. Recombinant vector vaccine evolution.PLoS computational biology · 2019
    Article
  7. Validated Models of Immune Response to Virus Infection.Current opinion in systems biology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

James MooreDepartment of Biology, Emory University, Atlanta, GA, USA. j.r.moore@emory.edu.
Hasan AhmedDepartment of Biology, Emory University, Atlanta, GA, USA.
Jonathan JiaDepartment of Biology, Emory University, Atlanta, GA, USA.
Rama AkondyDepartment of Microbiology and Immunology, Emory University, Atlanta, GA, USA.
Rafi AhmedEmory Vaccine Center, Emory University, Atlanta, GA, USA.
Rustom AntiaDepartment of Biology, Emory University, Atlanta, GA, USA.
Emory University · US

Funding

VACCINE INDUCED IMMUNITY IN THE YOUNG AND AGEDU19AI057266 · NIAID · EMORY UNIVERSITY · PI Rafi Ahmed · 2003 to 2026
$81.7M
Understanding Transmission with Integrated Genetic and Epidemiologic InferenceU54GM111274 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BEDFORD, TREVOR BC · 2014 to 2018
$12.5M
Modeling the dynamics and evolution of immune responses to influenza virusesU19AI117891 · NIAID · EMORY UNIVERSITY · PI AHMED, RAFI, ANTIA, RUSTOM NOSHIR · 2015 to 2019
$8.4M
QUANTIFYING THE BALANCE BETWEEN VACCINE-INDUCED T CELL PROTECTION AND PATHOLOGYR01AI110720 · NIAID · EMORY UNIVERSITY · PI ANTIA, RUSTOM NOSHIR · 2014 to 2018
$2.0M
NIAID NIH HHS R01 AI110720NIAID NIH HHS U19 AI057266NIAID NIH HHS U19 AI117891NIGMS NIH HHS U54 GM111274NIH HHS GM111274NIH HHS R01 AI1107020NIH HHS U19AI057266NIH HHS U19 AI11789102
6 · The paper itself

Abstract

Does target cell depletion, innate immunity, or adaptive immunity play the dominant role in controlling primary acute viral infections? Why do some individuals have higher peak virus titers than others? Answering these questions is a basic problem in immunology and can be particularly difficult in humans due to limited data, heterogeneity in responses in different individuals, and limited ability for experimental manipulation. We address these questions for infections following vaccination with the live attenuated yellow fever virus (YFV-17D) by analyzing viral load data from 80 volunteers. Using a mixed effects modeling approach, we find that target cell depletion models do not fit the data as well as innate or adaptive immunity models. Examination of the fits of the innate and adaptive immunity models to the data allows us to select a minimal model that gives improved fits by widely used model selection criteria (AICc and BIC) and explains why it is hard to distinguish between the innate and adaptive immunity models. We then ask why some individuals have over 1000-fold higher virus titers than others and find that most of the variation arises from differences in the initial/maximum growth rate of the virus in different individuals.

Indexed as

Models, ImmunologicalAcute DiseaseAdaptive ImmunityHumansImmunity, InnateMathematical ConceptsVaccinationVaccines, AttenuatedViral LoadYellow FeverYellow Fever VaccineYellow fever virusVaccines, AttenuatedYellow Fever Vaccine

Identifiers

PMID29110131
PMCPMC5766411
OpenAlexW2767360952

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.