Evidence map›Paper›PMID 29109187›Full record

ArticleJournal of bacteriology2018

Homologous VapC Toxins Inhibit Translation and Cell Growth by Sequence-Specific Cleavage of tRNA

Lauren R Walling, J Scott Butler

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Are all VapC toxins ofJournal of biosciences · 2024
    Article
  8. Article
  9. tRNAAntimicrobial agents and chemotherapy · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Microorganisms · 2019
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Lauren R WallingDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, New York, USA.
J Scott ButlerDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, New York, USA scott_butler@urmc.rochester.edu.
University of Rochester Medical Center · US

Funding

Training in Cellular, Biochemical and Molecular SciencesT32GM068411 · NIGMS · UNIVERSITY OF ROCHESTER · PI MAQUAT, LYNNE E · 2005 to 2019
$3.9M
Infection and Immunity: The Pathogenesis of Host-Microbe InteractionsT32AI118689 · NIAID · UNIVERSITY OF ROCHESTER · PI Paul M. Dunman, BRIAN M WARD · 2015 to 2026
$2.5M
Novel whole cell HTS for inhibitors of bacterial toxin-antitoxin interactionR01GM099731 · NIGMS · UNIVERSITY OF ROCHESTER · PI BUTLER, JAMES SCOTT · 2012 to 2014
$856k
Acquisition of a Typhoon FLA 9500 Laser Scanning ImagerS10OD021489 · OD · UNIVERSITY OF ROCHESTER · PI BUTLER, JAMES SCOTT · 2017 to 2017
$130k
NIAID NIH HHS T32 AI118689NIGMS NIH HHS R01 GM099731NIGMS NIH HHS T32 GM068411NIH HHS S10 OD021489
6 · The paper itself

Abstract

Type II toxin-antitoxin (TA) systems play a critical role in the establishment and maintenance of bacterial dormancy. They are composed of a protein toxin and its cognate protein antitoxin. They function to regulate growth under conditions of stress, such as starvation or antibiotic treatment. As cellular proteases degrade the antitoxin, which normally binds and neutralizes the toxin, this frees the toxin to act on its cellular targets and arrest bacterial growth. TA systems are of particular concern in regard to pathogenic organisms, such as nontypeable

Indexed as

Gene Expression Regulation, BacterialAntitoxinsBacterial ProteinsBacterial ToxinsEndonucleasesEscherichia coliHaemophilus influenzaeProtein BiosynthesisRNA, Transfer, MetSequence Analysis, RNAAntitoxinsBacterial ProteinsBacterial ToxinsEndonucleasesRNA, Transfer, MetendonucleaseNTHipersistersRNAtoxin-antitoxintRNA

Identifiers

PMID29109187
PMCPMC5763043
OpenAlexW2767883582

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.