Evidence map›Paper›PMID 29108134›Full record

ArticleCytoskeleton (Hoboken, N.J.)2018

Production of recombinant human tektin 1, 2, and 4 and in vitro assembly of human tektin 1.

M S Budamagunta, F Guo, N Sun, B Shibata, P G FitzGerald, J C Voss, J F Hess

Open access · greenAbstract read
In one paragraph

Article in Cytoskeleton (Hoboken, N.J.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 85% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

M S BudamaguntaDepartment of Biochemistry and Molecular Medicine, School of Medicine, University of California, Davis, California, 95616.
F GuoDepartment of Molecular and Cellular Biology, University of California, Davis, California, 95616.
N SunDepartment of Cell Biology and Human Anatomy, School of Medicine, University of California, Davis, California, 95616.
B ShibataDepartment of Cell Biology and Human Anatomy, School of Medicine, University of California, Davis, California, 95616.
P G FitzGeraldDepartment of Cell Biology and Human Anatomy, School of Medicine, University of California, Davis, California, 95616.
J C VossDepartment of Biochemistry and Molecular Medicine, School of Medicine, University of California, Davis, California, 95616.
J F HessDepartment of Cell Biology and Human Anatomy, School of Medicine, University of California, Davis, California, 95616.
University of California, Davis · US

Funding

VISION RESEARCH CORE GRANTP30EY012576 · NEI · UNIVERSITY OF CALIFORNIA DAVIS · PI LISA M OAKES · 1999 to 2026
$18.9M
SDSL-EPR STUDY OF INTERMEDIATE FILAMENT STRUCTURER01EY015560 · NEI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI FITZGERALD, PAUL GILLESPIE · 2006 to 2015
$3.0M
NEI NIH HHS P30 EY012576NEI NIH HHS R01 EY015560
6 · The paper itself

Abstract

Proteins predicted to be composed of large stretches of coiled-coil structure have often proven difficult to crystallize for structural determination. We have successfully applied EPR spectroscopic techniques to the study of the structure and assembly of full-length human vimentin assembled into native 11 nm filaments, in physiologic solution, circumventing the limitations of crystallizing shorter peptide sequences. Tektins are a small family of highly alpha helical filamentous proteins found in the doublet microtubules of cilia and related structures. Tektins exhibit several similarities to intermediate filaments (IFs): moderate molecular weight, highly alpha helical, hypothesized to be coiled-coil, and homo- and heteromeric assembly into long smooth filaments. In this report, we show the application of IF research methodologies to the study of tektin structure and assembly. To begin in vitro studies, expression constructs for human tektins 1, 2, and 4 were synthesized. Recombinant tektins were produced in E. coli and purified by chromatography. Preparations of tektin 1 successfully formed filaments. The recombinant human tektin 1 was used to produce antibodies which recognized an antigen in mouse testes, most likely present in sperm flagella. Finally, we report the creation of seven mutants to analyze predictions of coiled-coil structure in the rod 1A domain of tektin 1. Although this region is predicted to be coiled-coil, our EPR analysis does not reflect the parallel, in register, coiled-coil structure as demonstrated in vimentin and kinesin. These results document that tektin can be successfully expressed and assembled in vitro, and that SDSL EPR techniques can be used for structural analysis.

Indexed as

Escherichia coliHumansMicrotubule ProteinsRecombinant ProteinsMicrotubule ProteinsRecombinant Proteinstektinscoiled-coil structureEPR spectroscopyhuman tektinin vitro filament assembly

Identifiers

PMID29108134
PMCPMC5771813
OpenAlexW2767634513

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.