Evidence map›Paper›PMID 29104946›Full record

ArticleCurrent opinion in systems biology2017

An operational view of intercellular signaling pathways.

Yaron E Antebi, Nagarajan Nandagopal, Michael B Elowitz

Abstract read
In one paragraph

Article in Current opinion in systems biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Article
  2. Coenzyme Q10 and Intracellular Signalling Pathways: Clinical Relevance.International journal of molecular sciences · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Molecular principles underlying aggressive cancers.Signal transduction and targeted therapy · 2025
    Review
  7. Photoreceptor-Like Signal Transduction Between Polymer-Based Protocells.Advanced materials (Deerfield Beach, Fla.) · 2025
    Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Functional and Clinical Proteomic Exploration of Pancreatic Cancer.Molecular & cellular proteomics : MCP · 2023
    Review
  15. Review
  16. Review
  17. Review
  18. Review
  19. Input integration by the circadian clock exhibits nonadditivity and fold-change detection.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yaron E AntebiDivision of Biology and Biological Engineering and Department of Applied Physics, California Institute of Technology, Pasadena, CA 91125, USA.
Nagarajan NandagopalDivision of Biology and Biological Engineering and Department of Applied Physics, California Institute of Technology, Pasadena, CA 91125, USA.
Michael B ElowitzDivision of Biology and Biological Engineering and Department of Applied Physics, California Institute of Technology, Pasadena, CA 91125, USA.

Funding

Quantitative Single-Cell Analysis of Mammalian Notch Signaling StatesR01HD075335 · NICHD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ELOWITZ, MICHAEL B · 2012 to 2024
$3.7M
Stochastic Pulsing in Microbial Regulation and DifferentiationR01GM079771 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ELOWITZ, MICHAEL B · 2007 to 2015
$2.8M
NICHD NIH HHS R01 HD075335NIGMS NIH HHS R01 GM079771
6 · The paper itself

Abstract

Animal cells use a conserved repertoire of intercellular signaling pathways to communicate with one another. These pathways are well-studied from a molecular point of view. However, we often lack an "operational" understanding that would allow us to use these pathways to rationally control cellular behaviors. This requires knowing what dynamic input features each pathway perceives and how it processes those inputs to control downstream processes. To address these questions, researchers have begun to reconstitute signaling pathways in living cells, analyzing their dynamic responses to stimuli, and developing new functional representations of their behavior. Here we review important insights obtained through these new approaches, and discuss challenges and opportunities in understanding signaling pathways from an operational point of view.

Identifiers

PMID29104946
PMCPMC5665397

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.