Evidence map›Paper›PMID 29103623›Full record

ArticleNeurobiology of aging2018

Polygenic risk score in postmortem diagnosed sporadic early-onset Alzheimer's disease.

Sultan Chaudhury, Tulsi Patel, Imelda S Barber, Tamar Guetta-Baranes, Keeley J Brookes, Sally Chappell, James Turton, Rita Guerreiro, Jose Bras, Dena Hernandez and 5 more

Open access · greenAbstract read
In one paragraph

Article in Neurobiology of aging, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 2 pooled it
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 2 syntheses or guidelines pooled it, 48 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Alzheimer's disease polygenic risk in early- and late-onset Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
  5. Article
  6. The genetic landscape of early-onset Alzheimer's disease in China.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. The MUC6/AP2A2 Locus and Its Relevance to Alzheimer's Disease: A Review.Journal of neuropathology and experimental neurology · 2020
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Sultan ChaudhuryHuman Genetics Group, University of Nottingham, Nottingham, UK.
Tulsi PatelHuman Genetics Group, University of Nottingham, Nottingham, UK.
Imelda S BarberHuman Genetics Group, University of Nottingham, Nottingham, UK.
Tamar Guetta-BaranesHuman Genetics Group, University of Nottingham, Nottingham, UK.
Keeley J BrookesHuman Genetics Group, University of Nottingham, Nottingham, UK.
Sally ChappellHuman Genetics Group, University of Nottingham, Nottingham, UK.
James TurtonHuman Genetics Group, University of Nottingham, Nottingham, UK.
Rita GuerreiroDepartment of Molecular Neuroscience, Institute of Neurology, University College London, London, UK; Department of Medical Sciences, Institute of Biomedicine-iBiMED, University of Aveiro, Aveiro, Portugal; UK Dementia Research Institute at UCL (UK DRI), London, UK.
Jose BrasDepartment of Molecular Neuroscience, Institute of Neurology, University College London, London, UK; Department of Medical Sciences, Institute of Biomedicine-iBiMED, University of Aveiro, Aveiro, Portugal; UK Dementia Research Institute at UCL (UK DRI), London, UK.
Dena HernandezLaboratory of Neurogenetics, National Institute of Aging, National Institute of Health, Bethesda, MD, USA.
Andrew SingletonLaboratory of Neurogenetics, National Institute of Aging, National Institute of Health, Bethesda, MD, USA.
John HardyDepartment of Molecular Neuroscience, Institute of Neurology, University College London, London, UK; UK Dementia Research Institute at UCL (UK DRI), London, UK.
David MannFaculty of Medical and Human Sciences, Institute of Brain, Behaviour and Mental Health, University of Manchester, Manchester, UK.
ARUK Consortium
Kevin MorganHuman Genetics Group, University of Nottingham, Nottingham, UK. Electronic address: kevin.morgan@nottingham.ac.uk.
University of Nottingham · GBManchester Academic Health Science Centre · GBUK Dementia Research Institute · GBNational Institute on Aging · USUniversity of Manchester · GB

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
NATIONAL ALZHEIMERS COORDINATING CENTER (NACC)U01AG016976 · NIA · UNIVERSITY OF WASHINGTON · PI KUKULL, WALTER ANTHONY · 1999 to 2020
$72.8M
Alzheimer's Disease Genetics ConsortiumU01AG032984 · NIA · UNIVERSITY OF PENNSYLVANIA · PI SCHELLENBERG, GERARD DAVID · 2009 to 2024
$60.4M
CHARGE Consortium: Omics Discovery for CVD and Aging PhenotypesR01HL105756 · NHLBI · UNIVERSITY OF WASHINGTON · PI Bruce M Psaty, NICHOLAS L SMITH · 2011 to 2026
$9.5M
Genetic Analysis Of Alzheimer s DiseaseZIAAG000950 · NIA · NATIONAL INSTITUTE ON AGING · PI SINGLETON, ANDREW · 2009 to 2019
$6.9M
Collaborative GWAS of Dementia, AD and related MRI and Cognitive EndophenotypesR01AG033193 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SESHADRI, SUDHA · 2009 to 2016
$4.4M
Genetic Analysis Of Alzheimer's DiseaseZ01AG000950 · NIA · NATIONAL INSTITUTE ON AGING · PI SINGLETON, ANDREW · 2002 to 2008
$1.0M
Alzheimer's Society 200Intramural NIH HHS Z01 AG000950Medical Research Council 503480Medical Research Council G0400074Medical Research Council G0502157Medical Research Council G0701075Medical Research Council G0900652Medical Research Council G1100540NHLBI NIH HHS R01 HL105756NIA NIH HHS R01 AG033193NIA NIH HHS U01 AG016976NIA NIH HHS U01 AG032984NIA NIH HHS U24 AG021886Parkinson's UK G-0907Wellcome TrustWellcome Trust 082604/2/07/Z
6 · The paper itself

Abstract

Sporadic early-onset Alzheimer's disease (sEOAD) exhibits the symptoms of late-onset Alzheimer's disease but lacks the familial aspect of the early-onset familial form. The genetics of Alzheimer's disease (AD) identifies APOEε4 to be the greatest risk factor; however, it is a complex disease involving both environmental risk factors and multiple genetic loci. Polygenic risk scores (PRSs) accumulate the total risk of a phenotype in an individual based on variants present in their genome. We determined whether sEOAD cases had a higher PRS compared to controls. A cohort of sEOAD cases was genotyped on the NeuroX array, and PRSs were generated using PRSice. The target data set consisted of 408 sEOAD cases and 436 controls. The base data set was collated by the International Genomics of Alzheimer's Project consortium, with association data from 17,008 late-onset Alzheimer's disease cases and 37,154 controls, which can be used for identifying sEOAD cases due to having shared phenotype. PRSs were generated using all common single nucleotide polymorphisms between the base and target data set, PRS were also generated using only single nucleotide polymorphisms within a 500 kb region surrounding the APOE gene. Sex and number of APOE ε2 or ε4 alleles were used as variables for logistic regression and combined with PRS. The results show that PRS is higher on average in sEOAD cases than controls, although there is still overlap among the whole cohort. Predictive ability of identifying cases and controls using PRSice was calculated with 72.9% accuracy, greater than the APOE locus alone (65.2%). Predictive ability was further improved with logistic regression, identifying cases and controls with 75.5% accuracy.

Indexed as

Genome-Wide Association StudyMultifactorial InheritanceAgedAllelesAlzheimer DiseaseApolipoproteins ECohort StudiesFemaleGene-Environment InteractionGenome, HumanGenotyping TechniquesHumansLogistic ModelsMaleMiddle AgedPhenotypeApoE protein, humanApolipoproteins EGenotypingNeuroChipNeuroXPolygenic risk score (PRS)Sporadic early-onset Alzheimer's disease (sEOAD)

Identifiers

PMID29103623
PMCPMC5995122
OpenAlexW2762879721

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.