Evidence map›Paper›PMID 29102819›Full record

ArticleJournal of magnetic resonance (San Diego, Calif. : 1997)2017

Robust and transferable quantification of NMR spectral quality using IROC analysis.

Matthew A Zambrello, Mark W Maciejewski, Adam D Schuyler, Gerard Weatherby, Jeffrey C Hoch

Abstract read
In one paragraph

Article in Journal of magnetic resonance (San Diego, Calif. : 1997), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Evaluating metrics of spectral quality in nonuniform sampling.Journal of magnetic resonance open · 2025
    Article
  2. Article
  3. High fidelity sampling schedules for NMR spectra of high dynamic range.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Matthew A ZambrelloUConn Health, Department of Molecular Biology and Biophysics, 263 Farmington Ave., Farmington, CT 06030-3305, USA.
Mark W MaciejewskiUConn Health, Department of Molecular Biology and Biophysics, 263 Farmington Ave., Farmington, CT 06030-3305, USA.
Adam D SchuylerUConn Health, Department of Molecular Biology and Biophysics, 263 Farmington Ave., Farmington, CT 06030-3305, USA.
Gerard WeatherbyUConn Health, Department of Molecular Biology and Biophysics, 263 Farmington Ave., Farmington, CT 06030-3305, USA.
Jeffrey C HochUConn Health, Department of Molecular Biology and Biophysics, 263 Farmington Ave., Farmington, CT 06030-3305, USA. Electronic address: hoch@uchc.edu.

Funding

TRD3 NMRbox: Bayesian AnalyticsP41GM111135 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HOCH, JEFFREY C · 2015 to 2024
$14.0M
Maximum Entropy Deconvolution for Resolution & Sensitivity Enhancement in Bio-NMRR21GM104517 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HOCH, JEFFREY C · 2013 to 2014
$437k
Novel Computational Techniques to Expand the Scope of Protein Nuclear Magnetic Resonance SpectroscopyF30DE026353 · NIDCR · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI ZAMBRELLO, MATTHEW · 2016 to 2019
$178k
NIDCR NIH HHS F30 DE026353NIGMS NIH HHS P41 GM111135NIGMS NIH HHS R21 GM104517
6 · The paper itself

Abstract

Non-Fourier methods are increasingly utilized in NMR spectroscopy because of their ability to handle nonuniformly-sampled data. However, non-Fourier methods present unique challenges due to their nonlinearity, which can produce nonrandom noise and render conventional metrics for spectral quality such as signal-to-noise ratio unreliable. The lack of robust and transferable metrics (i.e. applicable to methods exhibiting different nonlinearities) has hampered comparison of non-Fourier methods and nonuniform sampling schemes, preventing the identification of best practices. We describe a novel method, in situ receiver operating characteristic analysis (IROC), for characterizing spectral quality based on the Receiver Operating Characteristic curve. IROC utilizes synthetic signals added to empirical data as "ground truth", and provides several robust scalar-valued metrics for spectral quality. This approach avoids problems posed by nonlinear spectral estimates, and provides a versatile quantitative means of characterizing many aspects of spectral quality. We demonstrate applications to parameter optimization in Fourier and non-Fourier spectral estimation, critical comparison of different methods for spectrum analysis, and optimization of nonuniform sampling schemes. The approach will accelerate the discovery of optimal approaches to nonuniform sampling experiment design and non-Fourier spectrum analysis for multidimensional NMR.

Indexed as

ROC CurveAlgorithmsFourier AnalysisMagnetic Resonance SpectroscopyNormal DistributionSignal-To-Noise RatioWorkflowSensitivity metricSpectral qualitySpectrum analysis

Identifiers

PMID29102819
PMCPMC5731825

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.