Evidence map›Paper›PMID 29100543›Full record

ArticleBMC biology2017

Characterization of a thalamic nucleus mediating habenula responses to changes in ambient illumination.

Ruey-Kuang Cheng, Seetha Krishnan, Qian Lin, Caroline Kibat, Suresh Jesuthasan

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Neural circuits for decision-making based on pineal photoreception in zebrafish.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. On analogies in vertebrate and insect visual systems.Nature reviews. Neuroscience · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Ruey-Kuang ChengLee Kong Chian School of Medicine, Nanyang Technological University, Singapore, 636921, Singapore.
Seetha KrishnanNUS Graduate School for Integrative Sciences and Engineering, 28 Medical Drive, National University of Singapore, Singapore, 117456, Singapore.
Qian LinNUS Graduate School for Integrative Sciences and Engineering, 28 Medical Drive, National University of Singapore, Singapore, 117456, Singapore.
Caroline KibatNeural Circuitry and Behavior Laboratory, Institute of Molecular and Cell Biology, Singapore, 138673, Singapore.
Suresh JesuthasanLee Kong Chian School of Medicine, Nanyang Technological University, Singapore, 636921, Singapore. sureshj@ntu.edu.sg.ORCID 0000-0002-5733-6555
National University of Singapore · SGInstitute of Molecular and Cell Biology · SGNanyang Technological University · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNeural activity in the vertebrate habenula is affected by ambient illumination. The nucleus that links photoreceptor activity with the habenula is not well characterized. Here, we describe the location, inputs and potential function of this nucleus in larval zebrafish.

resultsHigh-speed calcium imaging shows that light ON and OFF both evoke a rapid response in the dorsal left neuropil of the habenula, indicating preferential targeting of this neuropil by afferents conveying information about ambient illumination. Injection of a lipophilic dye into this neuropil led to bilateral labeling of a nucleus in the anterior thalamus that responds to light ON and OFF, and that receives innervation from the retina and pineal organ. Lesioning the neuropil of this thalamic nucleus reduced the habenula response to light ON and OFF. Optogenetic stimulation of the thalamus with channelrhodopsin-2 caused depolarization in the habenula, while manipulation with anion channelrhodopsins inhibited habenula response to light and disrupted climbing and diving evoked by illumination change.

conclusionsA nucleus in the anterior thalamus of larval zebrafish innervates the dorsal left habenula. This nucleus receives input from the retina and pineal, responds to increase and decrease in ambient illumination, enables habenula responses to change in irradiance, and may function in light-evoked vertical migration.

Indexed as

LightAnimalsAnterior Thalamic NucleiHabenulaNeuronsZebrafishCalcium imagingDiel vertical migrationHabenulaIrradianceNon-visualThalamusTwo-photon imagingZebrafish

Identifiers

PMID29100543
PMCPMC5670518
OpenAlexW2950175918

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.