ArticleBMC plant biology2017
Genome-wide analysis of the cellulose synthase-like (Csl) gene family in bread wheat (Triticum aestivum L.).
Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
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Who cites it
36 citing papers in PubMed, 72 citations in OpenAlex.
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- GWAS in a Collection of Bulgarian Old and Modern Bread Wheat Accessions Uncovers Novel Genomic Loci for Grain Protein Content and Thousand Kernel Weight.Plants (Basel, Switzerland) · 2024Article
- Genome-wide analysis of cellulose synthase gene superfamily in3 Biotech · 2024Article
- Genome-wide analysis of cellulose synthase (CesA) and cellulose synthase-like (Csl) proteins inPeerJ · 2024Article
- Genetic Approaches to Increase Arabinoxylan and β-Glucan Content in Wheat.Plants (Basel, Switzerland) · 2023Review
- A chromosome-level genome assembly for Erianthus fulvus provides insights into its biofuel potential and facilitates breeding for improvement of sugarcane.Plant communications · 2023Article
- Nutritional Genomic Approach for Improving Grain Protein Content in Wheat.Foods (Basel, Switzerland) · 2023Article
- Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids).BMC genomics · 2023Article
- Identification and bioinformatic analysis of the CaCesA/Csls family members and the expression of the CaCslD1 in the flower buds of CMS/Rf system in pepper.Functional & integrative genomics · 2022Article
- Cellulose synthase-like protein OsCSLD4 plays an important role in the response of rice to salt stress by mediating abscisic acid biosynthesis to regulate osmotic stress tolerance.Plant biotechnology journal · 2022Article
- Identification and Fine Mapping of the Recessive GeneInternational journal of molecular sciences · 2022Article
- Species-Specific Gene Expansion of theFrontiers in plant science · 2022Article
- Genome-Wide Identification and Characterization ofFrontiers in genetics · 2022Article
- Genome-Wide Investigation of theFrontiers in plant science · 2022Article
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- Genome-Wide Investigation of theInternational journal of molecular sciences · 2021Article
- Genome-wide identification and expression analysis of the TaYUCCA gene family in wheat.Molecular biology reports · 2021Article
- Genome-Wide Identification of BananaPlants (Basel, Switzerland) · 2021Article
- The Genetic Architecture of Grain Yield in Spring Wheat Based on Genome-Wide Association Study.Frontiers in genetics · 2021Article
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Authors and funding
4 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundHemicelluloses are a diverse group of complex, non-cellulosic polysaccharides, which constitute approximately one-third of the plant cell wall and find use as dietary fibres, food additives and raw materials for biofuels. Genes involved in hemicellulose synthesis have not been extensively studied in small grain cereals.
resultsIn efforts to isolate the sequences for the cellulose synthase-like (Csl) gene family from wheat, we identified 108 genes (hereafter referred to as TaCsl). Each gene was represented by two to three homeoalleles, which are named as TaCslXY_ZA, TaCslXY_ZB, or TaCslXY_ZD, where X denotes the Csl subfamily, Y the gene number and Z the wheat chromosome where it is located. A quarter of these genes were predicted to have 2 to 3 splice variants, resulting in a total of 137 putative translated products. Approximately 45% of TaCsl genes were located on chromosomes 2 and 3. Sequences from the subfamilies C and D were interspersed between the dicots and grasses but those from subfamily A clustered within each group of plants. Proximity of the dicot-specific subfamilies B and G, to the grass-specific subfamilies H and J, respectively, points to their common origin. In silico expression analysis in different tissues revealed that most of the genes were expressed ubiquitously and some were tissue-specific. More than half of the genes had introns in phase 0, one-third in phase 2, and a few in phase 1.
conclusionDetailed characterization of the wheat Csl genes has enhanced the understanding of their structural, functional, and evolutionary features. This information will be helpful in designing experiments for genetic manipulation of hemicellulose synthesis with the goal of developing improved cultivars for biofuel production and increased tolerance against various stresses.
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