Evidence map›Paper›PMID 29100095›Full record

ArticleAmerican journal of human genetics2017

Mutations in GPAA1, Encoding a GPI Transamidase Complex Protein, Cause Developmental Delay, Epilepsy, Cerebellar Atrophy, and Osteopenia.

Thi Tuyet Mai Nguyen, Yoshiko Murakami, Eamonn Sheridan, Sophie Ehresmann, Justine Rousseau, Anik St-Denis, Guoliang Chai, Norbert F Ajeawung, Laura Fairbrother, Tyler Reimschisel and 22 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 65 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Molecular Insights into Fungal Glycosylphosphatidylinositol Transamidase Complex.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Observational
  8. Article
  9. Article
  10. Review
  11. [Glycosylphosphatidylinositol biosynthesis deficiency 15 caused byZhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2023
    Article
  12. Article
  13. Article
  14. A Novel HomozygousGenes · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Structure of human glycosylphosphatidylinositol transamidase.Nature structural & molecular biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 15 institutions in 6 countries.

Thi Tuyet Mai NguyenCentre Hospitalier Universitaire Sainte Justine Research Center, University of Montreal, Montreal, QC H3T1C5, Canada.
Yoshiko MurakamiYabumoto Department of Intractable Disease Research, Research Institute for Microbial Diseases, and Immunology Frontier Research Center, Osaka University, Osaka 565-0871, Japan.
Eamonn SheridanFaculty of Medicine and Health University of Leeds, Leeds LS2 9JT, UK.
Sophie EhresmannCentre Hospitalier Universitaire Sainte Justine Research Center, University of Montreal, Montreal, QC H3T1C5, Canada.
Justine RousseauCentre Hospitalier Universitaire Sainte Justine Research Center, University of Montreal, Montreal, QC H3T1C5, Canada.
Anik St-DenisCentre Hospitalier Universitaire Sainte Justine Research Center, University of Montreal, Montreal, QC H3T1C5, Canada.
Guoliang ChaiHoward Hughes Medical Institute, Rady Children's Institute for Genomic Medicine, Department of Neuroscience, University of California, San Diego, San Diego, CA 92093, USA.
Norbert F AjeawungCentre Hospitalier Universitaire Sainte Justine Research Center, University of Montreal, Montreal, QC H3T1C5, Canada.
Laura FairbrotherDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Tyler ReimschiselDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Alexandra BatemanDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
Elizabeth Berry-KravisDepartments of Pediatrics, Neurological Sciences, and Biochemistry, Rush University Medical Center, Rush University, Chicago, IL 60612, USA.
Fan XiaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Jessica TardifCentre Hospitalier Universitaire Sainte Justine Research Center, University of Montreal, Montreal, QC H3T1C5, Canada.
David A ParryFaculty of Medicine and Health University of Leeds, Leeds LS2 9JT, UK.
Clare V LoganFaculty of Medicine and Health University of Leeds, Leeds LS2 9JT, UK.
Christine DiggleFaculty of Medicine and Health University of Leeds, Leeds LS2 9JT, UK.
Christopher P BennettFaculty of Medicine and Health University of Leeds, Leeds LS2 9JT, UK.
Louise HattinghDepartment of Radiology, Bradford Royal Infirmary, Duckworth Lane, Bradford BD9 6RJ, UK.
Jill A RosenfeldDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Michael Scott PerryComprehensive Epilepsy Program, Jane and John Justin Neuroscience Center, Cook Children's Medical Center, Fort Worth, TX 76104, USA.
Michael J ParkerSheffield Children's Hospital NHS Foundation Trust, Western Bank, Sheffield S10 2TH, UK.
Françoise Le DeistCentre Hospitalier Universitaire Sainte Justine Research Center, University of Montreal, Montreal, QC H3T1C5, Canada.
Maha S ZakiClinical Genetics Department, Human Genetics and Genome Research Division, National Research Centre, Cairo 12311, Egypt.
Erika IgnatiusResearch Programs Unit, Molecular Neurology, University of Helsinki, 00290 Helsinki, Finland; Department of Child Neurology, Children's Hospital, University of Helsinki and Helsinki University Hospital, Hospital District of Helsinki and Uusimaa, 00029 Helsinki, Finland.
Pirjo IsohanniResearch Programs Unit, Molecular Neurology, University of Helsinki, 00290 Helsinki, Finland; Department of Child Neurology, Children's Hospital, University of Helsinki and Helsinki University Hospital, Hospital District of Helsinki and Uusimaa, 00029 Helsinki, Finland.
Tuula LönnqvistDepartment of Child Neurology, Children's Hospital, University of Helsinki and Helsinki University Hospital, Hospital District of Helsinki and Uusimaa, 00029 Helsinki, Finland.
Christopher J CarrollResearch Programs Unit, Molecular Neurology, University of Helsinki, 00290 Helsinki, Finland; Molecular and Clinical Sciences Research Institute, St. George's, University of London, Cranmer Terrace, London SW17 0RE, UK.
Colin A JohnsonFaculty of Medicine and Health University of Leeds, Leeds LS2 9JT, UK.
Joseph G GleesonHoward Hughes Medical Institute, Rady Children's Institute for Genomic Medicine, Department of Neuroscience, University of California, San Diego, San Diego, CA 92093, USA.
Taroh KinoshitaYabumoto Department of Intractable Disease Research, Research Institute for Microbial Diseases, and Immunology Frontier Research Center, Osaka University, Osaka 565-0871, Japan.
Philippe M CampeauCentre Hospitalier Universitaire Sainte Justine Research Center, University of Montreal, Montreal, QC H3T1C5, Canada; Department of Pediatrics, University of Montreal, Montreal, QC H3T 1J4, Canada. Electronic address: p.campeau@umontreal.ca.
Centre Hospitalier Universitaire Sainte-Justine · CAUniversity of Leeds · GBUniversity of Helsinki · FIVanderbilt University Medical Center · USBaylor College of Medicine · USOsaka University · JPBradford Royal Infirmary · GBChildren’s Institute · USCook Children's Medical Center · USHelsinki University Hospital · FIHoward Hughes Medical Institute · USNational Research Centre · EGRush University Medical Center · USSheffield Children's Hospital · GBUniversité de Montréal · CA

Funding

Joint Center for Mendelian GenomicsUM1HG008900 · NHGRI · BROAD INSTITUTE, INC. · PI O'DONNELL-LURIA, ANNE, REHM, HEIDI L · 2016 to 2020
$16.5M
Molecular Characterization of Joubert SyndromeR01NS048453 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLEESON, JOSEPH G · 2004 to 2020
$6.0M
Molecular Characterization of Pontocerebellar HypoplasiaR01NS098004 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JOSEPH G GLEESON · 2016 to 2026
$4.6M
Medical Research Council MR/K011154/1NHGRI NIH HHS UM1 HG008900NINDS NIH HHS R01 NS048453NINDS NIH HHS R01 NS098004Wellcome Trust
6 · The paper itself

Abstract

Approximately one in every 200 mammalian proteins is anchored to the cell membrane through a glycosylphosphatidylinositol (GPI) anchor. These proteins play important roles notably in neurological development and function. To date, more than 20 genes have been implicated in the biogenesis of GPI-anchored proteins. GPAA1 (glycosylphosphatidylinositol anchor attachment 1) is an essential component of the transamidase complex along with PIGK, PIGS, PIGT, and PIGU (phosphatidylinositol-glycan biosynthesis classes K, S, T, and U, respectively). This complex orchestrates the attachment of the GPI anchor to the C terminus of precursor proteins in the endoplasmic reticulum. Here, we report bi-allelic mutations in GPAA1 in ten individuals from five families. Using whole-exome sequencing, we identified two frameshift mutations (c.981_993del [p.Gln327Hisfs

Indexed as

AcyltransferasesAdolescentAdultAllelesAtrophyBone Diseases, MetabolicCerebellumChildChild, PreschoolDevelopmental DisabilitiesEpilepsyExomeFemaleFibroblastsGlycosylphosphatidylinositolsHumansAcyltransferasesCOOH-terminal signal transamidaseGlycosylphosphatidylinositolsGPAA1 protein, humanMembrane GlycoproteinsRNA, Messengeralkaline phosphataseepilepsyglycosylphosphatidylinositolGPAA1GPIosteopeniaseizures

Identifiers

PMID29100095
PMCPMC5673666
OpenAlexW2767058310

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.