Evidence map›Paper›PMID 29098736›Full record

ArticleProtein science : a publication of the Protein Society2018

Structural characterization of the catalytic γ and regulatory β subunits of phosphorylase kinase in the context of the hexadecameric enzyme complex.

Mary Ashley Rimmer, Owen W Nadeau, Antonio Artigues, Gerald M Carlson

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Parameter Reliability and Understanding Enzyme Function.Molecules (Basel, Switzerland) · 2022
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mary Ashley RimmerDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, 66160.
Owen W NadeauDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, 66160.
Antonio ArtiguesDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, 66160.
Gerald M CarlsonDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, 66160.
University of Kansas Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the tightly regulated glycogenolysis cascade, the breakdown of glycogen to glucose-1-phosphate, phosphorylase kinase (PhK) plays a key role in regulating the activity of glycogen phosphorylase. PhK is a 1.3 MDa hexadecamer, with four copies each of four different subunits (α, β, γ and δ), making the study of its structure challenging. Using hydrogen-deuterium exchange, we have analyzed the regulatory β subunit and the catalytic γ subunit in the context of the intact non-activated PhK complex to study the structure of these subunits and identify regions of surface exposure. Our data suggest that within the non-activated complex the γ subunit assumes an activated conformation and are consistent with a previous docking model of the β subunit within the cryoelectron microscopy envelope of PhK.

Indexed as

AnimalsCatalytic DomainCryoelectron MicroscopyGlycogenolysisHumansModels, MolecularPhosphorylase KinaseProtein MultimerizationProtein Structure, QuaternaryProtein SubunitsPhosphorylase KinaseProtein Subunitscalmodulinhydrogen-deuterium exchangemass spectrometrymolecular modelingoligomeric proteinsphosphorylase kinase

Identifiers

PMID29098736
PMCPMC5775173
OpenAlexW2766148197

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.