Evidence map›Paper›PMID 29098191›Full record

ArticleCurrent protocols in plant biology2017

Detecting the interaction of peptide ligands with plant membrane receptors.

Sarah Refi Hind, Jason S Hoki, Joshua A Baccile, Patrick C Boyle, Frank C Schroeder, Gregory B Martin

Abstract read
In one paragraph

Article in Current protocols in plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sarah Refi HindBoyce Thompson Institute, Ithaca, New York.
Jason S HokiBoyce Thompson Institute, Ithaca, New York.
Joshua A BaccileBoyce Thompson Institute, Ithaca, New York.
Patrick C BoyleBoyce Thompson Institute, Ithaca, New York.
Frank C SchroederBoyce Thompson Institute, Ithaca, New York.
Gregory B MartinBoyce Thompson Institute, Ithaca, New York.

Funding

CHEMISTRY OF BIOLOGICAL SYSTEMST32GM008500 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIN, HENING · 1996 to 2020
$5.4M
NIGMS NIH HHS T32 GM008500
6 · The paper itself

Abstract

The field of plant receptor biology has rapidly expanded in recent years, however the demonstration of direct interaction between receptor-ligand pairs remains a challenge. Click chemistry has revolutionized small molecule research but lacks popularity in plant research. Here we describe a method that tests for the direct physical interaction of a candidate receptor protein and a peptide ligand. This protocol describes the generation of the ligand probe, transient expression of a receptor protein, enrichment of membrane-bound receptors, photo-crosslinking and click chemistry-mediated reporter addition, and detection of the receptor-ligand complex. Copper-based click chemistry confers several advantages, including the versatility to use almost any azide-containing reporter molecule for detection or visualization of the complex and addition of the reporter molecule after receptor-ligand binding which reduces the need for bulky ligand modifications that could interfere with the interaction.

Indexed as

AzidesClick ChemistryCopperGenes, ReporterLigandsPeptidesPlant ProteinsProtein BindingReceptors, PeptideAzidesCopperLigandsPeptidesPlant ProteinsReceptors, Peptideclick chemistryligandphoto-crosslinkingPlant receptor

Identifiers

PMID29098191
PMCPMC5661964

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.