Evidence map›Paper›PMID 29097723›Full record

ArticleScientific reports2017

Genome-wide linkage and association study implicates the 10q26 region as a major genetic contributor to primary nonsyndromic vesicoureteric reflux.

John M Darlow, Rebecca Darlay, Mark G Dobson, Aisling Stewart, Pimphen Charoen, Jennifer Southgate, Simon C Baker, Yaobo Xu, Manuela Hunziker, Heather J Lambert and 9 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Primary vesicoureteral reflux.Nature reviews. Disease primers · 2024
    Review
  3. Review
  4. The term CAKUT has outlived its usefulness: the case for the defense.Pediatric nephrology (Berlin, Germany) · 2022
    Review
  5. Article
  6. Review
  7. Children with vesicoureteric reflux have joint hypermobility and occasional tenascin XB sequence variants.Canadian Urological Association journal = Journal de l'Association des urologues du Canada · 2020
    Article
  8. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 8 institutions in 5 countries.

John M DarlowDepartment of Clinical Genetics, Our Lady's Children's Hospital, Crumlin, Dublin 12, Ireland.
Rebecca DarlayInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK.
Mark G DobsonDepartment of Clinical Genetics, Our Lady's Children's Hospital, Crumlin, Dublin 12, Ireland.
Aisling StewartInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK.
Pimphen CharoenUCL Institute of Health Informatics, University College, London, NW1 2DA, UK.
Jennifer SouthgateJack Birch Unit of Molecular Carcinogenesis, Department of Biology, University of York, York, YO10 5DD, UK.ORCID 0000-0002-0135-480X
Simon C BakerJack Birch Unit of Molecular Carcinogenesis, Department of Biology, University of York, York, YO10 5DD, UK.ORCID 0000-0002-2755-6012
Yaobo XuInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK.
Manuela HunzikerNational Children's Research Centre, Our Lady's Children's Hospital, Crumlin, Dublin 12, Ireland.
Heather J LambertRoyal Victoria Infirmary, Newcastle upon Tyne, NE1 4LP, UK.
Andrew J GreenDepartment of Clinical Genetics, Our Lady's Children's Hospital, Crumlin, Dublin 12, Ireland.
Mauro Santibanez-KorefInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK.
John A SayerInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK.ORCID 0000-0003-1881-3782
Timothy H J GoodshipInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK.
Prem PuriNational Children's Research Centre, Our Lady's Children's Hospital, Crumlin, Dublin 12, Ireland.
Adrian S WoolfDivision of Cell Matrix Biology and Regenerative Medicine, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.ORCID 0000-0001-5541-1358
Rajko B KendaDepartment of Pediatric Nephrology, University Medical Centre Ljubljana, Ljubljana, Slovenia.
David E BartonDepartment of Clinical Genetics, Our Lady's Children's Hospital, Crumlin, Dublin 12, Ireland.
Heather J CordellInstitute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK. heather.cordell@newcastle.ac.uk.
Newcastle University · GBChildren's Health Ireland at Crumlin · IEUniversity College Dublin · IEUniversity of York · GBLjubljana University Medical Centre · SIMahidol University · THRoyal Victoria Infirmary · GBUniversity of Manchester · GB

Funding

Medical Research Council G0600040Medical Research Council G9815508Medical Research Council MC_PC_15018Medical Research Council MR/L002744/1Wellcome Trust 066647Wellcome Trust 070327Wellcome Trust 074524Wellcome Trust 087436Wellcome Trust 102858Wellcome Trust 102858/Z/13/Z
6 · The paper itself

Abstract

Vesicoureteric reflux (VUR) is the commonest urological anomaly in children. Despite treatment improvements, associated renal lesions - congenital dysplasia, acquired scarring or both - are a common cause of childhood hypertension and renal failure. Primary VUR is familial, with transmission rate and sibling risk both approaching 50%, and appears highly genetically heterogeneous. It is often associated with other developmental anomalies of the urinary tract, emphasising its etiology as a disorder of urogenital tract development. We conducted a genome-wide linkage and association study in three European populations to search for loci predisposing to VUR. Family-based association analysis of 1098 parent-affected-child trios and case/control association analysis of 1147 cases and 3789 controls did not reveal any compelling associations, but parametric linkage analysis of 460 families (1062 affected individuals) under a dominant model identified a single region, on 10q26, that showed strong linkage (HLOD = 4.90; ZLRLOD = 4.39) to VUR. The ~9Mb region contains 69 genes, including some good biological candidates. Resequencing this region in selected individuals did not clearly implicate any gene but FOXI2, FANK1 and GLRX3 remain candidates for further investigation. This, the largest genetic study of VUR to date, highlights the 10q26 region as a major genetic contributor to VUR in European populations.

Indexed as

Chromosomes, Human, Pair 10Case-Control StudiesCells, CulturedFamilyFemaleGenetic LinkageGenetic LociGenetic TestingGenome-Wide Association StudyHumansMaleVesico-Ureteral RefluxWhite People

Identifiers

PMID29097723
PMCPMC5668427
OpenAlexW2763977535

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.