Evidence map›Paper›PMID 29097205›Full record

ArticleBiochemical and biophysical research communications2018

Characterization of human AlkB homolog 1 produced in mammalian cells and demonstration of mitochondrial dysfunction in ALKBH1-deficient cells.

Tina A Müller, Sarah L Struble, Katheryn Meek, Robert P Hausinger

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Insights into the role of RNA mGenes & diseases · 2024
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. RNA mFrontiers in cell and developmental biology · 2021
    Review
  11. Review
  12. NFrontiers in molecular biosciences · 2021
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Tina A MüllerMicrobiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA.
Sarah L StrubleMicrobiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA.
Katheryn MeekMicrobiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA; Pathobiology and Diagnostic Investigation, Michigan State University, East Lansing, MI 48824, USA.
Robert P HausingerMicrobiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA; Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA. Electronic address: hausinge@msu.edu.
Michigan State University · US

Funding

Study of alpha-ketoglutarate-dependent dioxygenasesR01GM063584 · NIGMS · MICHIGAN STATE UNIVERSITY · PI HAUSINGER, ROBERT P · 2002 to 2014
$3.8M
'Indirect Readout'Mediation of Protein-DNA InteractionsR01GM063582 · NIGMS · YESHIVA UNIVERSITY · PI BRENOWITZ, MICHAEL D · 2001 to 2004
$1.0M
NIGMS NIH HHS R01 GM063582NIGMS NIH HHS R01 GM063584
6 · The paper itself

Abstract

Alkbh1 is a mammalian homolog of the Escherichia coli DNA repair enzyme AlkB, an Fe(II) and 2-oxoglutarate dependent dioxygenase that removes alkyl lesions from DNA bases. The human homolog ALKBH1 has been associated with six different enzymatic activities including DNA, mRNA, or tRNA hydroxylation, cleavage at abasic (AP) sites in DNA, as well as demethylation of histones. The reported cellular roles of this protein reflect the diverse enzymatic activities and include direct DNA repair, tRNA modification, and histone modification. We demonstrate that ALKBH1 produced in mammalian cells (ALKBH1

Indexed as

AlkB Homolog 1, Histone H2a DioxygenaseCell ProliferationDNA AdductsDNA-(Apurinic or Apyrimidinic Site) LyaseDNA Copy Number VariationsDNA, MitochondrialHEK293 CellsHumansMitochondriaRecombinant ProteinsSubstrate SpecificityALKBH1 protein, humanAlkB Homolog 1, Histone H2a DioxygenaseDNA AdductsDNA-(Apurinic or Apyrimidinic Site) LyaseDNA, MitochondrialRecombinant ProteinsAbasic siteAlkB homologAP lyaseDemethylaseDNA-protein adductMitochondria

Identifiers

PMID29097205
PMCPMC5736403
OpenAlexW2765507153

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.