Evidence map›Paper›PMID 29095994›Full record

ArticleFEMS microbiology ecology2017

Pyomelanin produced by Vibrio cholerae confers resistance to predation by Acanthamoeba castellanii.

Parisa Noorian, Jie Hu, Zhiliang Chen, Staffan Kjelleberg, Marc R Wilkins, Shuyang Sun, Diane McDougald

Open access · hybridAbstract read
In one paragraph

Article in FEMS microbiology ecology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Proteomic comparison of epidemic AustralianMicrobiology spectrum · 2025
    Article
  4. Article
  5. Single-cell RNA-seq reveals a key role forFrontiers in microbiology · 2025
    Article
  6. Article
  7. Mutation ofMicrobiology spectrum · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Parisa NoorianSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
Jie HuSchool of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore.
Zhiliang ChenSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
Staffan KjellebergSingapore Centre for Environmental Life Sciences Engineering, Nanyang Technological University, Singapore 637551, Singapore.
Marc R WilkinsSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
Shuyang SunThe ithree Institute, University of Technology Sydney, Sydney, NSW 2007, Australia.
Diane McDougaldSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.
Nanyang Technological University · SGUniversity of Technology Sydney · AUUNSW Sydney · AUSingapore Centre for Environmental Life Sciences Engineering · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protozoan predation is one of the main environmental factors constraining bacterial growth in aquatic environments, and thus has led to the evolution of a number of defence mechanisms that protect bacteria from predation. These mechanisms may also function as virulence factors in infection of animal and human hosts. Whole transcriptome shotgun sequencing of Vibrio cholerae biofilms during predation by the amoebae, Acanthamoeba castellanii, revealed that 131 transcripts were significantly differentially regulated when compared to the non-grazed control. Differentially regulated transcripts included those involved in biosynthetic and metabolic pathways. The transcripts of genes involved in tyrosine metabolism were down-regulated in the grazed population, which indicates that the tyrosine metabolic regulon may have a role in the response of V. cholerae biofilms to A. castellanii predation. Homogentisate 1, 2-dioxygenase (HGA) is the main intermediate of the normal L-tyrosine catabolic pathway which is known to auto-oxidize, leading to the formation of the pigment, pyomelanin. Indeed, a pigmented mutant, disrupted in hmgA, was more resistant to amoebae predation than the wild type. Increased grazing resistance was correlated with increased production of pyomelanin and thus reactive oxygen species (ROS), suggesting that ROS production is a defensive mechanism used by bacterial biofilms against predation by amoebae A. castellanii.

Indexed as

Acanthamoeba castellaniiAnimalsAntiprotozoal AgentsBiofilmsHomogentisate 1,2-DioxygenaseHumansHydrogen PeroxideMelaninsVibrio choleraeVirulence FactorsAntiprotozoal AgentsHomogentisate 1,2-DioxygenaseHydrogen PeroxideMelaninspyomelaninVirulence Factorsbiofilmsenvironmental fitnessgrazing resistancepigment productionprotozoan predationV. cholerae

Identifiers

PMID29095994
PMCPMC5812506
OpenAlexW2768572103

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.