Evidence map›Paper›PMID 29095904›Full record

ArticlePloS one2017

Selection and classification of gene expression in autism disorder: Use of a combination of statistical filters and a GBPSO-SVM algorithm.

Shilan S Hameed, Rohayanti Hassan, Fahmi F Muhammad

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. IoMT amid COVID-19 pandemic: Application, architecture, technology, and security.Journal of network and computer applications (Online) · 2021
    Review
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Shilan S HameedDepartment of Computer Science, Faculty of Computing, Universiti Teknologi Malaysia, Johor Bahru, Malaysia.
Rohayanti HassanDepartment of Software Engineering, Faculty of Computing, Universiti Teknologi Malaysia, Johor Bahru, Malaysia.
Fahmi F MuhammadDepartment of Physics, Faculty of Science & Health, Koya University, Koya, Kurdistan Region, Iraq.ORCID http://orcid.org/0000-0002-4563-9671

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this work, gene expression in autism spectrum disorder (ASD) is analyzed with the goal of selecting the most attributed genes and performing classification. The objective was achieved by utilizing a combination of various statistical filters and a wrapper-based geometric binary particle swarm optimization-support vector machine (GBPSO-SVM) algorithm. The utilization of different filters was accentuated by incorporating a mean and median ratio criterion to remove very similar genes. The results showed that the most discriminative genes that were identified in the first and last selection steps included the presence of a repetitive gene (CAPS2), which was assigned as the gene most highly related to ASD risk. The merged gene subset that was selected by the GBPSO-SVM algorithm was able to enhance the classification accuracy.

Indexed as

AlgorithmsGene ExpressionAutistic DisorderHumansSupport Vector Machine

Identifiers

PMID29095904
PMCPMC5667738

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.