Evidence map›Paper›PMID 29094190›Full record

ArticleJournal of molecular evolution2017

Evolution of Single-Domain Globins in Hydrothermal Vent Scale-Worms.

J Projecto-Garcia, A-S Le Port, T Govindji, D Jollivet, S W Schaeffer, S Hourdez

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 26 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

J Projecto-GarciaCNRS UMR 7144, Station Biologique de Roscoff, Place Georges Teissier, 29680, Roscoff, France. jucpgarcia@gmail.com.ORCID http://orcid.org/0000-0002-7802-2029
A-S Le PortCNRS UMR 7144, Station Biologique de Roscoff, Place Georges Teissier, 29680, Roscoff, France.
T GovindjiDepartment of Biology and Institute of Molecular Evolutionary Genetics, Pennsylvania State University, University Park, PA, 16802, USA.
D JollivetCNRS UMR 7144, Station Biologique de Roscoff, Place Georges Teissier, 29680, Roscoff, France.
S W SchaefferDepartment of Biology and Institute of Molecular Evolutionary Genetics, Pennsylvania State University, University Park, PA, 16802, USA.
S HourdezCNRS UMR 7144, Station Biologique de Roscoff, Place Georges Teissier, 29680, Roscoff, France.
Centre National de la Recherche Scientifique · FRPennsylvania State University · US

Funding

Conseil Régional de Bretagne HYPOXEVOFondation TOTAL Deep-Sea Annelid Biodiversity and EvolutionNational Science Foundation NSF OCE-0002729National Science Foundation NSF OCE 0240985National Science Foundation NSF OCE 0732333
6 · The paper itself

Abstract

Hypoxia at deep-sea hydrothermal vents represents one of the most basic challenges for metazoans, which then requires specific adaptations to acquire oxygen to meet their metabolic needs. Hydrothermal vent scale-worms (Polychaeta; Polynoidae) express large amounts of extracellular single- and multi-domain hemoglobins, in contrast with their shallow-water relatives that only possess intracellular globins in their nervous system (neuroglobins). We sequenced the gene encoding the single-domain (SD) globin from nine species of polynoids found in various vent and deep-sea reduced microhabitats (and associated constraints) to determine if the Polynoidae SD globins have been the targets of diversifying selection. Although extracellular, all the SD globins (and multi-domain ones) form a monophyletic clade that clusters within the intracellular globin group of other annelids, indicating that these hemoglobins have evolved from an intracellular myoglobin-like form. Positive selection could not be detected at the major ecological changes that the colonization of the deep-sea and hydrothermal vents represents. This suggests that no major structural modification was necessary to allow the globins to function under these conditions. The mere expression of these globins extracellularly may have been sufficiently advantageous for the polynoids living in hypoxic hydrothermal vents. Among hydrothermal vent species, positively selected amino acids were only detected in the phylogenetic lineage leading to the two mussel-commensal species (Branchipolynoe). In this lineage, the multiplicity of hemoglobins could have lessened the selective pressure on the SD hemoglobin, allowing the acquisition of novel functions by positive Darwinian selection. Conversely, the colonization of hotter environments (species of Branchinotogluma) does not seem to have required additional modifications.

Indexed as

Amino Acid SequenceAnimalsAnnelidaGlobinsHemoglobinsHydrothermal VentsOxygen ConsumptionPhylogenyPolychaetaSelection, GeneticGlobinsHemoglobinsExtracellular globinHemeOxygen affinityPolynoidaePositive selectionSingle-domain

Identifiers

PMID29094190
OpenAlexW2766480020

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.