Evidence map›Paper›PMID 29092812›Full record

ArticleJMIR public health and surveillance2017

Combining Participatory Influenza Surveillance with Modeling and Forecasting: Three Alternative Approaches.

John S Brownstein, Shuyu Chu, Achla Marathe, Madhav V Marathe, Andre T Nguyen, Daniela Paolotti, Nicola Perra, Daniela Perrotta, Mauricio Santillana, Samarth Swarup and 5 more

Abstract read
In one paragraph

Article in JMIR public health and surveillance, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

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  18. Article
  19. Socioeconomic bias in influenza surveillance.PLoS computational biology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

John S BrownsteinComputational Health Informatics Program, Boston Children's Hospital, Boston, MA, United States.ORCID http://orcid.org/0000-0001-8568-5317
Shuyu ChuNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute, Virginia Tech, Blacksburg, VA, United States.ORCID http://orcid.org/0000-0002-5208-4272
Achla MaratheNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute, Virginia Tech, Blacksburg, VA, United States.ORCID http://orcid.org/0000-0002-0258-1588
Madhav V MaratheNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute, Virginia Tech, Blacksburg, VA, United States.ORCID http://orcid.org/0000-0003-1653-0658
Andre T NguyenComputational Epidemiology Group, Division of Emergency Medicine, Boston Children's Hospital, Boston, MA, United States.ORCID http://orcid.org/0000-0001-7131-6879
Daniela PaolottiComputational Epidemiology Laboratory, Institute for Scientific Interchange, Turin, Italy.ORCID http://orcid.org/0000-0003-1356-3470
Nicola PerraCentre for Business Networks Analysis, University of Greenwich, London, United Kingdom.ORCID http://orcid.org/0000-0002-5559-3064
Daniela PerrottaComputational Epidemiology Laboratory, Institute for Scientific Interchange, Turin, Italy.ORCID http://orcid.org/0000-0003-3014-8551
Mauricio SantillanaComputational Health Informatics Program, Boston Children's Hospital, Boston, MA, United States.ORCID http://orcid.org/0000-0002-4206-418X
Samarth SwarupNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute, Virginia Tech, Blacksburg, VA, United States.ORCID http://orcid.org/0000-0003-3615-1663
Michele TizzoniComputational Epidemiology Laboratory, Institute for Scientific Interchange, Turin, Italy.ORCID http://orcid.org/0000-0001-7246-2341
Alessandro VespignaniLaboratory for the Modeling of Biological and Socio-technical Systems, Northeastern University, Boston, MA, United States.ORCID http://orcid.org/0000-0003-3419-4205
Anil Kumar S VullikantiNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute, Virginia Tech, Blacksburg, VA, United States.ORCID http://orcid.org/0000-0002-8597-6197
Mandy L WilsonNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute, Virginia Tech, Blacksburg, VA, United States.ORCID http://orcid.org/0000-0002-4778-5744
Qian ZhangLaboratory for the Modeling of Biological and Socio-technical Systems, Northeastern University, Boston, MA, United States.ORCID http://orcid.org/0000-0002-6157-9912

Funding

Understanding Transmission with Integrated Genetic and Epidemiologic InferenceU54GM111274 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI VESPIGNANI, ALESSANDRO · 2014 to 2018
$12.5M
Synthetic Information Systems for Better Informing Public Health PolicymakersU01GM070694 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI EUBANK, STEPHEN G, MARATHE, MADHAV VISHNU · 2004 to 2016
$8.6M
Systems Analysis of Social Pathways of Epidemics to Reduce Health DisparitiesR01GM109718 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI MARATHE, ACHLA, VULLIKANTI, ANIL · 2014 to 2022
$3.6M
NIGMS NIH HHS R01 GM109718NIGMS NIH HHS U01 GM070694NIGMS NIH HHS U54 GM111274
6 · The paper itself

Abstract

backgroundInfluenza outbreaks affect millions of people every year and its surveillance is usually carried out in developed countries through a network of sentinel doctors who report the weekly number of Influenza-like Illness cases observed among the visited patients. Monitoring and forecasting the evolution of these outbreaks supports decision makers in designing effective interventions and allocating resources to mitigate their impact.

objectiveDescribe the existing participatory surveillance approaches that have been used for modeling and forecasting of the seasonal influenza epidemic, and how they can help strengthen real-time epidemic science and provide a more rigorous understanding of epidemic conditions.

methodsWe describe three different participatory surveillance systems, WISDM (Widely Internet Sourced Distributed Monitoring), Influenzanet and Flu Near You (FNY), and show how modeling and simulation can be or has been combined with participatory disease surveillance to: i) measure the non-response bias in a participatory surveillance sample using WISDM; and ii) nowcast and forecast influenza activity in different parts of the world (using Influenzanet and Flu Near You).

resultsWISDM-based results measure the participatory and sample bias for three epidemic metrics i.e. attack rate, peak infection rate, and time-to-peak, and find the participatory bias to be the largest component of the total bias. The Influenzanet platform shows that digital participatory surveillance data combined with a realistic data-driven epidemiological model can provide both short-term and long-term forecasts of epidemic intensities, and the ground truth data lie within the 95 percent confidence intervals for most weeks. The statistical accuracy of the ensemble forecasts increase as the season progresses. The Flu Near You platform shows that participatory surveillance data provide accurate short-term flu activity forecasts and influenza activity predictions. The correlation of the HealthMap Flu Trends estimates with the observed CDC ILI rates is 0.99 for 2013-2015. Additional data sources lead to an error reduction of about 40% when compared to the estimates of the model that only incorporates CDC historical information.

conclusionsWhile the advantages of participatory surveillance, compared to traditional surveillance, include its timeliness, lower costs, and broader reach, it is limited by a lack of control over the characteristics of the population sample. Modeling and simulation can help overcome this limitation as well as provide real-time and long-term forecasting of influenza activity in data-poor parts of the world.

Indexed as

crowdsourcingdisease surveillanceforecastingnonresponse bias

Identifiers

PMID29092812
PMCPMC5688248

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.