Evidence map›Paper›PMID 29089494›Full record

ArticleNature communications2017

Molecular rheotaxis directs DNA migration and concentration against a pressure-driven flow.

Sarah M Friedrich, Jeffrey M Burke, Kelvin J Liu, Cornelius F Ivory, Tza-Huei Wang

Abstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Microscale Diffusiophoresis of Proteins.The journal of physical chemistry. B · 2022
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sarah M FriedrichBiomedical Engineering Department, Johns Hopkins University, Baltimore, MD, 21218, USA.ORCID http://orcid.org/0000-0001-9954-5438
Jeffrey M BurkeCirculomics, Inc., Baltimore, MD, 21211, USA.
Kelvin J LiuCirculomics, Inc., Baltimore, MD, 21211, USA.ORCID http://orcid.org/0000-0002-1164-582X
Cornelius F IvoryGene and Linda Voiland School of Chemical Engineering and Bioengineering, Washington State University, Pullman, WA, 99164, USA. cfivory@wsu.edu.
Tza-Huei WangBiomedical Engineering Department, Johns Hopkins University, Baltimore, MD, 21218, USA. thwang@jhu.edu.

Funding

A Droplet-based single cell platform for pathogen identification and ASTR01AI117032 · NIAID · JOHNS HOPKINS UNIVERSITY · PI LIAO, JOSEPH C, WANG, TZA-HUEI JEFF · 2015 to 2019
$5.7M
Multiplexed Detection of Cell Free DNA Biomarkers for CancerR01CA155305 · NCI · JOHNS HOPKINS UNIVERSITY · PI WANG, TZA-HUEI JEFF · 2011 to 2015
$1.7M
PicoSep - A Microfluidic Platform for Single Molecule DNA and RNA SizingR44GM103356 · NIGMS · CIRCULOMICS, INC. · PI LIU, KELVIN, WANG, TZA-HUEI JEFF · 2017 to 2018
$1.5M
Digital Detection of Tumor-Derived Circulating Methylated DNAR21CA186809 · NCI · JOHNS HOPKINS UNIVERSITY · PI WANG, TZA-HUEI JEFF · 2014 to 2016
$698k
PicoSep - A Microfluidic Single Molecule Free Solution Hydrodynamic Separation PlR43GM103356 · NIGMS · CIRCULOMICS, INC. · PI LIU, KELVIN, WANG, TZA-HUEI JEFF · 2012 to 2013
$399k
NCI NIH HHS R01 CA155305NCI NIH HHS R21 CA186809NIAID NIH HHS R01 AI117032NIGMS NIH HHS R43 GM103356NIGMS NIH HHS R44 GM103356
6 · The paper itself

Abstract

In-line preconcentration techniques are used to improve the sensitivity of microfluidic DNA analysis platforms. The most common methods are electrokinetic and require an externally applied electric field. Here we describe a microfluidic DNA preconcentration technique that does not require an external field. Instead, pressure-driven flow from a fluid-filled microcapillary into a lower ionic strength DNA sample reservoir induces spontaneous DNA migration against the direction of flow. This migratory phenomenon that we call Molecular Rheotaxis initiates in seconds and results in a concentrated DNA bolus at the capillary orifice. We demonstrate the ease with which this concentration method can be integrated into a microfluidic total analysis system composed of in-line DNA preconcentration, size separation, and single-molecule detection. Paired experimental and numerical simulation results are used to delineate the parameters required to induce Molecular Rheotaxis, elucidate the underlying mechanism, and optimize conditions to achieve DNA concentration factors exceeding 10,000 fold.

Indexed as

MotionPressureRheologyBuffersDNAElectricityHydrodynamicsIonsSolutionsTime FactorsBuffersDNAIonsSolutions

Identifiers

PMID29089494
PMCPMC5663963

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.