Evidence map›Paper›PMID 29089309›Full record

ArticleBlood2017

VLITL is a major cross-β-sheet signal for fibrinogen Aα-chain frameshift variants.

Cyrille Garnier, Fatma Briki, Brigitte Nedelec, Patrick Le Pogamp, Ahmet Dogan, Nathalie Rioux-Leclercq, Renan Goude, Caroline Beugnet, Laurent Martin, Marc Delpech and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 10 institutions in 2 countries.

Cyrille GarnierMécanismes Moléculaires dans les Démences Neurodégénératives INSERM U1198, Université Montpellier, Montpellier, France.
Fatma BrikiLaboratoire de Physique des Solides, Université Paris Sud, Orsay, France.
Brigitte NedelecInstitut National de la Santé et de la Recherche Médicale, Unité mixte de Recherche U_1163, Institut IMAGINE, Université Paris Descartes, Sorbonne Paris Cité, Paris, France.ORCID 0000-0002-4487-9438
Patrick Le PogampService de Néphrologie, CHU de Rennes, Rennes, France.
Ahmet DoganDivision of Anatomic Pathology, Mayo Clinic, Rochester, MN.
Nathalie Rioux-LeclercqDépartement d'Anatomie et Cytologie Pathologiques, Centre Hospitalo-Universitaire Pontchaillou, et CNRS/UMR6061, IFR140, Faculté de Médecine, Université de Rennes 1, Rennes, France.
Renan GoudeInstitut de Génétique et Développement de Rennes, Unité Mixte de Recherche 6290, Centre National de la Recherche Scientifique, Rennes, France.
Caroline BeugnetLaboratoire de Génétique Moléculaire, Hôpital Necker-Enfants Malades, Paris, Université Paris Descartes, Sorbonne Paris Cité, Faculté de Médecine Paris, AP-HP, Paris, France.
Laurent MartinService d'Anatomie Pathologique, Faculté de Médecine de Dijon, Dijon, France.
Marc DelpechLaboratoire de Biochimie et Génétique Moléculaire, Hôpital Cochin, Paris, Université Paris Descartes, Sorbonne Paris Cité, Faculté de Médecine Paris, AP-HP, Paris, France.
Frank BridouxService de Néphrologie, CHU de Poitiers, et Centre national de référence des amyloses AL et autres maladies de dépôts d'immunoglobulines monoclonales, Poitiers, France.
Gilles GrateauService de Médecine Interne, Hôpital Tenon, Paris, et Centre de référence des amyloses d'origine inflammatoire et de la fièvre méditerranéenne familiale, Paris, France; and.
Jean DoucetLaboratoire de Physique des Solides, Université Paris Sud, Orsay, France.
Philippe DerreumauxLaboratoire de Biochimie Théorique, UPR9080 CNRS, Université Denis Diderot, Sorbonne Paris Cité, IBPC, Institut Universitaire de France, Paris, France.ORCID 0000-0001-9110-5585
Sophie ValleixInstitut National de la Santé et de la Recherche Médicale, Unité mixte de Recherche U_1163, Institut IMAGINE, Université Paris Descartes, Sorbonne Paris Cité, Paris, France.ORCID 0000-0002-4812-7102
Délégation Paris 5 · FRCentre National de la Recherche Scientifique · FRUniversité Paris-Sud · FRCentre Hospitalier Universitaire de Rennes · FRHôpital Necker-Enfants Malades · FRInserm · FRInstitut de génétique et de développement de Rennes · FRMaison des Sciences sociales et des Humanités de Dijon · FRMayo Clinic · USSorbonne Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The first case of hereditary fibrinogen Aα-chain amyloidosis was recognized >20 years ago, but disease mechanisms still remain unknown. Here we report detailed clinical and proteomics studies of a French kindred with a novel amyloidogenic fibrinogen Aα-chain frameshift variant, Phe521Leufs, causing a severe familial form of renal amyloidosis. Next, we focused our investigations to elucidate the molecular basis that render this Aα-chain variant amyloidogenic. We show that a 49-mer peptide derived from the C-terminal part of the Phe521Leufs chain is deposited as fibrils in the patient's kidneys, establishing that only a small portion of Phe521Leufs directly contributes to amyloid formation in vivo. In silico analysis indicated that this 49-mer Aα-chain peptide contained a motif (VLITL), with a high intrinsic propensity for β-aggregation at residues 44 to 48 of human renal fibrils. To experimentally verify the amyloid propensity of VLITL, we generated synthetic Phe521Leufs-derived peptides and compared their capacity for fibril formation in vitro with that of their VLITL-deleted counterparts. We show that VLITL forms typical amyloid fibrils in vitro and is a major signal for cross-β-sheet self-association of the 49-mer Phe521Leufs peptide identified in vivo, whereas its absence abrogates fibril formation. This study provides compelling evidence that VLITL confers amyloidogenic properties to Aα-chain frameshift variants, yielding a previously unknown molecular basis for the pathogenesis of Aα-chain amyloidosis.

Indexed as

Frameshift MutationAmino Acid MotifsAmino Acid SequenceAmyloidAmyloidosis, FamilialFibrinogenHumansKidneyProtein Conformation, beta-StrandAmyloidFibrinogenfibrinogen Aalpha

Identifiers

PMID29089309
PMCPMC5843806
OpenAlexW2765170816

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.